Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2718 |
Symbol | |
ID | 5059181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3061524 |
End bp | 3063110 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640474974 |
Product | major facilitator transporter |
Protein accession | YP_001159540 |
Protein GI | 145595243 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.571064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.832187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA CGATCCCGGC CAGGGCCGGG CGACGGGAAT GGATCGCGCT GGCCGTATTG GCCCTGCCGA CGTTGCTGGT CTCCATCGAC ATCTACAGCC TGCTCCTCGC GCTTCCCAAC CTGACGGCGG ACCTGGGCGC GAGCAGCGTT CAGCAGCTCT GGATCACGGA CATCTACGTG TTCATGCTAG CCGGGTTCCT GATCACGATG GGCACGCTCG GTGACCGTAT CGGTCGTAGG AAGCTGCTAC TGATCGGAGC CGCAGCGTTC GGCGTCACAT CCGTCGTCGC GGCGTACTCC GTCAGTCCCG AGATGCTGAT CGCCACCCGT GCCCTGCTCG GTGTGGCCGG TGCGATCCTG GCACCGTCGA CCATGTCACT GATTCGCACC CTGTTCCGGG ATCCGAAGCA GATGGGATTG GCGATCGGTA TCTGGGGGCT CTGCTTCTCG GCCGGCGCGG TGATCGGCCC GGTTGTCGGT GGTGCACTGC TGTCCCACTT CTGGTGGGGC TCGGTCTTCC TGCTCGGAGT GCCGGCGATG GTGCTGCTGC TTGCCGTCGG CCCAGCCCTG TTGCCCGAGT ACCGAGACCC GAACGCCGGC GACCTGGATC TCATCAGCGT GGCGCTGTCA CTGGCTGCTG TACTACCGTC CATCTACGGG CTCAAGGAGC TGGCGAAGAA CGGTTGGCAG GGAGTGCCGA TCGTTGCCAT CGTGATCGGG ATCATCTTCG CTGTGCTCTT CGTCCGCAGG CAGCAGCGGC TCGAGAACCC GCTACTGGAC CTGCGGCTGT TCGCAAGCCG GTCTTTCACC GTAGCGCTCA TCGGCCTGAT GTTCGGCACG CTGCTGATGG GTTCGATCAT GCTGTTCGTC ACCCAGGATC TGCAGTTGGT AGAGGGCCTG TCGCCGTTCG ATGCCGGCCT GTGGCTGCTG CCCGCCGTAC TGGCGAACGC GGTGTCGTTC ATTGTGTCGC CCCTGCTTGC CCGCCGCTTC CGGCCGGCAC ACGTGATCGG CGTGGGTCTG GCGATCTCCG TGTCTGGGCT GCTCGTGCTT ACTCAGACTG ACGCCATGTC GGGCCCCACC ACCCTTGTGA CTGGGTTCAC ACTGGTCCTC TTCGGCGCTG GGCCCCTGGT GACGCTGGGC ATTCAACTGA TCCTGGCCTC GGCGCCGGCG GAGAAGGCTG GTTCAGCTGC CGCCCTGAAC GAAACCGGCG GCCAGTTCGG CTTCGCCTTC GGGCTTGCCG TGCTCGGCAG CATCGGTTTC GCGGTGTATG ACAGCCGCTT CACCCCACCT GCTGATGTTC CCGCCGGCGC GGCCGATACC GCACGGGAGA GCCTCGCCGA CGCAGTGGTT GTCGCGCGTG ACCTGCCTCC GGAGCAGGCC GACGCCCTAC TCGCGTCGGC ACGGGAAGCG TTCGTCTTCG GGTTGCACCT AGTCAGTGCG ATCAGCGCGG TGGTCCTCGC GGTCGTCGCC CTGCTGATCG TCCGGCTGCT ACGCGGGGTC GCCCCGACCG GCACCGCGCC CGACGACGAG AGCGCCACGA ACGACGCCCC ACGCAGCGAG GAGAAGCGTG CCATGCTGGG GGACTGA
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Protein sequence | MNDTIPARAG RREWIALAVL ALPTLLVSID IYSLLLALPN LTADLGASSV QQLWITDIYV FMLAGFLITM GTLGDRIGRR KLLLIGAAAF GVTSVVAAYS VSPEMLIATR ALLGVAGAIL APSTMSLIRT LFRDPKQMGL AIGIWGLCFS AGAVIGPVVG GALLSHFWWG SVFLLGVPAM VLLLAVGPAL LPEYRDPNAG DLDLISVALS LAAVLPSIYG LKELAKNGWQ GVPIVAIVIG IIFAVLFVRR QQRLENPLLD LRLFASRSFT VALIGLMFGT LLMGSIMLFV TQDLQLVEGL SPFDAGLWLL PAVLANAVSF IVSPLLARRF RPAHVIGVGL AISVSGLLVL TQTDAMSGPT TLVTGFTLVL FGAGPLVTLG IQLILASAPA EKAGSAAALN ETGGQFGFAF GLAVLGSIGF AVYDSRFTPP ADVPAGAADT ARESLADAVV VARDLPPEQA DALLASAREA FVFGLHLVSA ISAVVLAVVA LLIVRLLRGV APTGTAPDDE SATNDAPRSE EKRAMLGD
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