Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2704 |
Symbol | |
ID | 5059167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3045293 |
End bp | 3046945 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474960 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001159526 |
Protein GI | 145595229 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.051308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.893433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCA TCGAGAGTAC CGACGTTGTG GTGGTCGGCA GCGGGTTCGG CGGCGCGATC ACCGCATACC ATCTAGCCGC GGGCGGTGCT CGGGTGGTGG TGTTGGAGCG TGGTCCGTGG CTGACGGGCC AGGACTTTGA CCAGGATTTC AAATTCGGGG CTTCCTCGAC CCGGGCCTTC GACTTCACCG TCGGGGACGG CATGAGCGTG CTGGCCGGCA ACTGCGTCGG TGGCGGCAGT GTTGTCTACT TCGCCGCGAT GCCGCGTGCT CCACGCTTCG TCTTCGAGCG GCACGGCAGC ATCGGTCGGC GGATGTGGCC GGCCGCGGTC AGCCGCGACA CCCTTGAACC GTGGTACGAC CGGGTCGCTG AGGCGTTGCC GGTTACCGGC CAGAGCTGGT CCGATGTGCC GTACTCAGGT GGTCTGTGGG CGGCGGCCTG CGACCACGCC GGGCGCACGG CGAACCCGGT GCCGGTGGCG ATCGACAACC AGCGGTGTGT CAACTGCAAC TGGATGATGT CCGGCTGCCG CTTCGATGCC AAGCGCTCCC TGCTGCTCAA CTACCTACCG GCCGCGATAG CTCACGGCGC CCACATCCGA CCCCTGCACG AGGTGCAGCG GCTTGAGCGG ACTGATGGTG GCTATCGCCT GCATTACACA GTAGTCGATG ACGTTGACTA CCGGGTGGAA ACGGGCGGCG GTGCGATCGA TGCGAAAATC GTGGTGCTGG CATCGGGAGC CGGGGCCACC CCGGTAATTC TGCAACGTTC CGCCGAGCTG CTCGGCCCGA TGCCCGCGGC CGTGGGTCGC TACTTCTCCG GAAACGGGGA GCGGCTGAAC ACCGCGGTCG TCAATGAGGA CCGGGTGCGC GACGTGCTGG GACTCAGCCG TTCGGACGGG GTGCCGTACG AGGCATACCA GATTGGCAAG GGGCCGTGCG TGGCCAGCTG GGACCGGCTC GACGGATCGT TGCCGGAGTA CCTCCGCTAC TCGCTGGAAC AGCTCTACTT CCCGCCCGGG TTCGGCACCA TCCTCGCCCA GGTTCCCGAC GCCACCGGGC CGACGTGGTT TGGGGCGGAG AAGAAGGAAC TTCTGCGCCA CTGGAAGTCC TGGCTGACCA TCTTCACGAT GAGCGAGGAC GACAACGAGG GTGTGTTTGG CCCGCCGCCG CCTACCGGCA ACGCCGTTCG GGTCTCCCAG CAGATGTTGG GACGGGGGGC GCTACGTTAC CGGCCCACCG AGAATACGCT GCGCGGATGG GCCGCCTCTG ACGCGGAGGT GCGGGATATT CTCGAACGCG ACGGCCTCGC CCGGGTAATG CCGTGGACCA ACGACGTGGT CGGGGCGTAT ACCGTGCACC CACTGGCCTC GTGTCGCATC GGCGACGACC CGGCCACCTC GGCACTGGAC GACCGGCACG AACTGCGAGG TCACCCCGGC ATCTTCGTCA CCGACGGCTC GGCGGTCCCC GGGGCGTTGA CGGTGAATCC CGCCATGACC ATCGCCGCGC TGGCCGAGCG GGCAATCCCC GCCATCGTCG AAGCCGCGCG GCAGCGCGGC GTCGCAGTGC GGTACGGCGC GCCGTCCCCG GATGGCGCCA CCGCTGGCCG GAATGCCGTG TTGCCACTGG TGAGCGGCGG TACCGGCCGC TGA
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Protein sequence | MTAIESTDVV VVGSGFGGAI TAYHLAAGGA RVVVLERGPW LTGQDFDQDF KFGASSTRAF DFTVGDGMSV LAGNCVGGGS VVYFAAMPRA PRFVFERHGS IGRRMWPAAV SRDTLEPWYD RVAEALPVTG QSWSDVPYSG GLWAAACDHA GRTANPVPVA IDNQRCVNCN WMMSGCRFDA KRSLLLNYLP AAIAHGAHIR PLHEVQRLER TDGGYRLHYT VVDDVDYRVE TGGGAIDAKI VVLASGAGAT PVILQRSAEL LGPMPAAVGR YFSGNGERLN TAVVNEDRVR DVLGLSRSDG VPYEAYQIGK GPCVASWDRL DGSLPEYLRY SLEQLYFPPG FGTILAQVPD ATGPTWFGAE KKELLRHWKS WLTIFTMSED DNEGVFGPPP PTGNAVRVSQ QMLGRGALRY RPTENTLRGW AASDAEVRDI LERDGLARVM PWTNDVVGAY TVHPLASCRI GDDPATSALD DRHELRGHPG IFVTDGSAVP GALTVNPAMT IAALAERAIP AIVEAARQRG VAVRYGAPSP DGATAGRNAV LPLVSGGTGR
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