| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2653 |
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| Symbol | |
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| ID | 5059116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2978870 |
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| End bp | 2980423 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640474909 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001159475 |
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| Protein GI | 145595178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0051152 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.33796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACCC CTGTCAGATC CCGCCCACTC CGGCGGGGGC TGCTACCCCT CGTCACCGTC
GCCCTGCTGC TGGCCGGTTG TGGCGCCGAC ACCACGACCG GTAGTTCCGT CGACGAGCCC
GGCACGCCGG TCGACGGCGG CACCCTGCGC TACGTCGTAC CGGGTTCGCC GGCGACCGCG
AGCAACGATC CGCACGGCGG ACTCGGCAAC GAATCCGACC TCATGCGGTT CGCGCTGACC
TACGACGTGC TCACCGTGCC CGGCACCGAC GGGACGCCGC AACCGCGGCT GGCCCAAACG
TGGGAGGCGA ACCAGAGCCT GGACCGCTGG ACTTTTCATC TGCGCGAGGA CGCCACCTTC
ACCGACGGCC AGCCGGTACT CGCCAAGGAC GTGCTCTACT CCCTGACCCG GATAGCGGAC
AAGGCCGCGG AGAACTACGG CCGACTGGCC GACTTCGACA TGGCAGCCGC CAGCGCACCC
GACGACCACA CGGTGATCCT GGCGACCCGT ACGCCGATGG CCGAAGCGCC GAAGGCGCTG
GAGTCGATCA GCTTTGTCGT TCCCGAGGGC AGCACGGACT TCGCCGAGCC GGTACGCGGT
TCGGGGCCGT TTCGGGTGAC CGAGACCGAC GCCCAAACCG CCGTACTTCT GCGTAACGAC
GACTGGTGGG GCGAGCGACC GCACCTGGAC CGGATCGAGA TCCGGGCGGT CGCCGACCCG
CAGGCCCGTG CGGCCGCCGT CACCTCCGGG CAGGCGGACG TAGCCGGTAG CGTCAGCCCG
GCGGCCGTCA AGGCCGCCGA GGCCGGCGGT GATGTGCAGG TCGTCCGCCG CAAGGGTGTC
ACCGAGTACC CGATCATCAT GCGGCTGGAC TCGGCACCGT TCGATGACCC GCGAGTACGG
GAGGCGCTCC GGCTCGCGAC CGATCGACAG GCACTCGTCG ACACGGTGTT CCTCGGATAC
GGTCAGATCG CCAACGATCT ACCCACCCCG TACGACCCGT CGTACCCGCA GGGTCTGACG
CAGCGCACCC AGGACCTTGA CCGGGCCAGG GAACTGCTCG AGCAGGCCGG GCACGCGGAC
GGGCTGGCGT TGACCCTGCA CACCACGACG TCGTACCCCG GCATGGACAC CGCGGCCACC
CTGTGGGCCC GGCAACTCGC CGACGTCGGC GTACAGGTCG ACGTGAAGGT GGAGCCGGCG
GACACCTACT GGACCGCCAT CTACGCCAAG AAGGACTTCT ACGTCGGATA CTACGGCGGC
ATTTCCTTCC CCGACCTGGT ACGCGTCGGC CTGCTTGCCG CATCGCCGAC CAACGAGACC
GCCTGGCGCA ACGCGTCGTT CGACGCCGAG TTCAATGCCG CCATGGGCAT CCTGGACCCG
ACCGAGCGCA ACGCCCGACT GGCCGGCATC CAGCAGGACC TCTGGCGCGA CGGAGGGTAC
GTGGTGTGGG GCGTCGGAGA TGGGTTGGAT CTGACCGCCC CCGGTGTGCG CGCTCTGCCC
GACGGTCCCG GCTTCCAGCG GATGTTCATC GAACGCGCCT GGAAGACGAG GTGA
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| Protein sequence | MLTPVRSRPL RRGLLPLVTV ALLLAGCGAD TTTGSSVDEP GTPVDGGTLR YVVPGSPATA
SNDPHGGLGN ESDLMRFALT YDVLTVPGTD GTPQPRLAQT WEANQSLDRW TFHLREDATF
TDGQPVLAKD VLYSLTRIAD KAAENYGRLA DFDMAAASAP DDHTVILATR TPMAEAPKAL
ESISFVVPEG STDFAEPVRG SGPFRVTETD AQTAVLLRND DWWGERPHLD RIEIRAVADP
QARAAAVTSG QADVAGSVSP AAVKAAEAGG DVQVVRRKGV TEYPIIMRLD SAPFDDPRVR
EALRLATDRQ ALVDTVFLGY GQIANDLPTP YDPSYPQGLT QRTQDLDRAR ELLEQAGHAD
GLALTLHTTT SYPGMDTAAT LWARQLADVG VQVDVKVEPA DTYWTAIYAK KDFYVGYYGG
ISFPDLVRVG LLAASPTNET AWRNASFDAE FNAAMGILDP TERNARLAGI QQDLWRDGGY
VVWGVGDGLD LTAPGVRALP DGPGFQRMFI ERAWKTR
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