Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2611 |
Symbol | |
ID | 5059074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2931245 |
End bp | 2932876 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474867 |
Product | cholesterol oxidase |
Protein accession | YP_001159433 |
Protein GI | 145595136 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGTA CGAGCCTTTC CCGACGTGGC CTGCTAAGGG CCACCACGCT CGGCGCCGGC GTCGCCGTCG CTGGGGTCGC ACTAGGCCAG CAGGCGGCCC AGGCGGGTGG TCCGGTACCC GCGTTGGCCG GGAAGACCGC CGTGGTCATC GGCAGTGGCT TCGGCGGGGC GGTCGCCGCT TACCGACTCG GCCAGGCCGG AGTGGTGACC ACGGTGTTGG AACGAGGTCG CCGCTGGGAC GTGGACGGCT CCGGCAACAC GTTTTGCAGC ATCAATGAGC CCGACTGGCG GTGTGGCTGG TTCCTGGACC GCCCGCCATT GGGAATCAAC CTCGGCGCGA GGATCGAACA ACGGGCCGGG TTGATCGCCC GACACGACGG AGATGGAATC TCGGTGCTGA GCGGAACCGG AGTTGGCGGC GGCTCCCTCG CCATCGGGAT GTTCCTACCG CAGCCGCGGC GCAGCGAGTG GGAGCAGGTG TATCCGACCG AGGTCGGATA CGACGAGATG AACGATGTCT ACTGGCCACG GGCCCGGCAA CGCCTCGGTG CGACGCCAAT TCCCGAGGAT GTGCAGAGCA CCGGCCCCTA CCGGGGAGCC CGAGCCTGGC TCGACTACCT GTCCGAGTTC AAGCAGACCC CCCTCCCCAT TCCGTTCGCC GTCGACTGGG ACGTGATCCG CGCCGAGCTC GCCGGTGACA CCGTGCCGTG CCACACGATC GGTGAGGGCC CGTACGGCAG CAACTCCGGG GCGAAGAACA GCGTGGACCG CAACTACCTC GCCTGGGCCG CTGCGACCGG CAACGTGACC ACACTGGCGT TGCACGAGGT CACCGAGATC CATGAGGTGT CCGGTCAGGA CAAGTTCGAG ATCCGGTGCC GACAGATCGA CGAGCACGGC TCGGTCCTCT CCACGAAGAC CTTCGTCTGC GACTACCTGT TCATGGCCGC CGGCTCCGTC TACACCACCT CCCTGCTGCT CACCTCCCAG GCCAAGGGCT GGCTTCCCCG CCTGGTCAAC CAGGAGGTGG GCAAGGGCTG GGGCAACAAC GGCGACTTCC TGGTGACCCG GATCAACCTG CGAAAGGACG TCGGCTACGC CCAGGGCGGT CCGGGTAACG TCAAGTACAT CGACGAGGAC AACCCGTACG CACCCACCTC GATGGCGTGG GAGGCAGCAC CTGTCCCCCG TTGGATGCCG CGTACCACGG CGCACCTGGT GACCAGCATG ACTCCGGAAC GTGGCGAGAT TCGCTACGAC GCGGCGACCG GGGCCGGTAA GGTGCACTGG CCGTACGGGA CGCTGGAGAC CACCTCCGAG AAGGCGGCGG TGAACCTGGT TACCCGGTTG TGGTGGCAGA CCGAAGGCCG CAAGGGATAC CTCCTGCACG GTCTGCCGAC CTACGCCCGG GGTGTCGGCA CCGGGCTCGG TGCCGCGAAC ACCTGGCATC CGCTGGGCGG CATGGTTATG GGCAAGGCCA CCGACTTCGA CGGTCGATGC GTCGACTACC CCAACCTCTT CTGCATCGAC GGATCGCTCC TGCCGGGGTC AACCTGCCTG GCAAACCCTT CGCTGACCAT CACCGCGAAC GCCGAACGCT GCATGGACCG GTTCGTCGCC GCGCACTCCT GA
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Protein sequence | MTGTSLSRRG LLRATTLGAG VAVAGVALGQ QAAQAGGPVP ALAGKTAVVI GSGFGGAVAA YRLGQAGVVT TVLERGRRWD VDGSGNTFCS INEPDWRCGW FLDRPPLGIN LGARIEQRAG LIARHDGDGI SVLSGTGVGG GSLAIGMFLP QPRRSEWEQV YPTEVGYDEM NDVYWPRARQ RLGATPIPED VQSTGPYRGA RAWLDYLSEF KQTPLPIPFA VDWDVIRAEL AGDTVPCHTI GEGPYGSNSG AKNSVDRNYL AWAAATGNVT TLALHEVTEI HEVSGQDKFE IRCRQIDEHG SVLSTKTFVC DYLFMAAGSV YTTSLLLTSQ AKGWLPRLVN QEVGKGWGNN GDFLVTRINL RKDVGYAQGG PGNVKYIDED NPYAPTSMAW EAAPVPRWMP RTTAHLVTSM TPERGEIRYD AATGAGKVHW PYGTLETTSE KAAVNLVTRL WWQTEGRKGY LLHGLPTYAR GVGTGLGAAN TWHPLGGMVM GKATDFDGRC VDYPNLFCID GSLLPGSTCL ANPSLTITAN AERCMDRFVA AHS
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