Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2607 |
Symbol | |
ID | 5059070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2926316 |
End bp | 2927377 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474863 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_001159429 |
Protein GI | 145595132 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCAG CACTGCGCAC CCGGCTGACC GAGTTGGTCG GTGTCCGGTA CCCCATCGTG CAGACCGGCA TGGGTTACGT CTCCGGTGCC CGGCTGACCG CGGCGACGGC CCAGGCCGGC GGCCTCGGCA TCATCGCCTC GGCCACGATG CACCTCGACG AGTTGCGCTC CGCGATCCAC GAGGTGCGTC GACGCACCTC CGCACCGTTC GGGGTCAACC TGCGCGCCGA CGCGACGGAC GTACGGGAGC GGGTCGAGTT GGTCATCGCG GAGTCGGTCC GGGTCGTCTC GTTCGCGCTC GCACCGCGCC GCGACCTCGT CCGCAGGCTC CGCGACGCCG GGGTCATCAC CATCCCGTCC GTCGGCGCCC TCCGGCACGC GGAAAAGGTG GCCGCCTGGG GCGCGGACGC CGTCCTGGTC CAGGGCGGCG AGGGTGGTGG GCACACGGGG ACGGTCCCCA CCAGCCTGCT CCTCCCCCAG GTGGTGGACG CGGTCGACAT TCCGGTGGTC GCGGCCGGCG GCTTCTTCGA CGGCCGCGGC CTGGTCTCGG CCCTCGCCTA CGGCGCGGCG GGAATCGCCA TGGGCACCCG ATTCCTGTTG ACCAGCGACA GCCCGGTCGG ATCGGCGGTG AAACAGGCCT ATCTAGACAG CGGTCCCACC GGCACGGTGG TCACCAGGCA GGTCGATGGA GTACCCCACC GGGTTCTCCG GACCCGGTTC GTCGATCGAC TCGAACGATC GGGGCGGATC AGCACACTGG CCCACGCGCT CGGGCGGGCC CTCGTGCTGC GCCGACTCAC CGGAGTGCCC TGGCCGACTC TGATTCGGGA CGGCTTCGCC GCCCGACGCA GCCGCGAACT CTCCTGGTCC CAGACGCTGA TGGCTGCCAA CACCCCGGTC CTACTCCGGG CGGCGATGGT GGACGGCCGA GCCGACCTCG GGGTGATGTC TGCCGGGCAG GTGGTGGGGC TGATCGATGA CCTACCCTCG TGCGCGGAAC TCATCGACCG GATCGTGGCC GAGGCAGCCG ACTGCCTTTC CCGGCTTACA ACCGCTCAAT GA
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Protein sequence | MHPALRTRLT ELVGVRYPIV QTGMGYVSGA RLTAATAQAG GLGIIASATM HLDELRSAIH EVRRRTSAPF GVNLRADATD VRERVELVIA ESVRVVSFAL APRRDLVRRL RDAGVITIPS VGALRHAEKV AAWGADAVLV QGGEGGGHTG TVPTSLLLPQ VVDAVDIPVV AAGGFFDGRG LVSALAYGAA GIAMGTRFLL TSDSPVGSAV KQAYLDSGPT GTVVTRQVDG VPHRVLRTRF VDRLERSGRI STLAHALGRA LVLRRLTGVP WPTLIRDGFA ARRSRELSWS QTLMAANTPV LLRAAMVDGR ADLGVMSAGQ VVGLIDDLPS CAELIDRIVA EAADCLSRLT TAQ
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