Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2602 |
Symbol | |
ID | 5059065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2921094 |
End bp | 2922020 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474858 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001159424 |
Protein GI | 145595127 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.263864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATC AGCAGTTCAC ACTGGATGGC ACCGTCGCGA TCGTGACCGG TGCGGGCAAC GGTCTGGGGC GTGCGGAAGC CCTCGAACTG GCGGCGAGTG GGGCCCGGCT CGTCCTCAAC GACCTACCCG GCGAGGCCAT CACGGCAGTG GCCGCCGAGA TCGCGGCTGC GGGCGGCGAG GCCACGGTGT GCACGGGTGA CATCGGCGAG TGGTCGACCG GTGAGTCCCT CGTGAACGCG GCTCTCGACA CGTACGGCCG GCTGGACATC TTGGTCAACA ACGCCGGCGT CCTCCGCGAC CGCATGGTCT TCACCATGTC AGCGCAGGAG TGGGATCTCG TCCTGCGGGT ACACCTGCGG GGTCACTTCG TGACCACTCG CTTCGCCACC GCCTACTGGC GCGAGCGCAG CAAGACACTC GGCACCCCCG TGTACGGTCG GATCATCAAC ACCTCCTCCG AGGCGTTTCT GCTCGGCTCG CCCGGCCAGC CGAACTATGC CGCTGCGAAA GCCGGCGTCG TGGCCCTCAC CGTCGCGACC GCGCGTAGCT GCGCCCGGTA CGGTGTCCGG GCCAACGCCA TCTGCCCGCG AGCGCGCACC GCAATGACCA GTGAGCTCAT GGGGCCTTCT CCCGATGACG CGACTGATCC GTTGTCTCCC ACGCATGTCG CACCGCTCGT GCGGTACCTC GCCAGTCCAG CCGGAGATCC GATCAACGGC GAGGTCTTCG TCATCCACGG TGGCGTGGCC GCGGTGCTGG CGCCACCCAC CGTGCGCGCG AGCTTCCACA CCGATGACGA GTCCTGGTCG CCATCCGCCC TACACGACGC CCTGGGACCG CTGTTCGGTG ACAAGGCCTC CGAAGCGGGA TTCGTCTGCG AGGCCACCTT GCCGCTGGCG ACGACCACGT TCGGCGAGAG CCGGTAG
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Protein sequence | MTDQQFTLDG TVAIVTGAGN GLGRAEALEL AASGARLVLN DLPGEAITAV AAEIAAAGGE ATVCTGDIGE WSTGESLVNA ALDTYGRLDI LVNNAGVLRD RMVFTMSAQE WDLVLRVHLR GHFVTTRFAT AYWRERSKTL GTPVYGRIIN TSSEAFLLGS PGQPNYAAAK AGVVALTVAT ARSCARYGVR ANAICPRART AMTSELMGPS PDDATDPLSP THVAPLVRYL ASPAGDPING EVFVIHGGVA AVLAPPTVRA SFHTDDESWS PSALHDALGP LFGDKASEAG FVCEATLPLA TTTFGESR
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