Gene Strop_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2598 
Symbol 
ID5059061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp2917209 
End bp2917820 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID640474854 
Producttranscriptional regulator PadR family protein 
Protein accessionYP_001159420 
Protein GI145595123 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.10372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCCC GCCGACATCC GTCATCACTC GGAGTGGGAG GTCTGACCAT GGCGCTGCGG 
CACGCGGTGC TGGCGGTGCT GCTCGATGGT GAGTACAGCG GCTACCAGCT AGCCAAGATC 
TTCGACGTCT CCTTCTCCAA CTTCTGGTAC GCGGTGCCCC AGCAGCTCTA TGCCGAGTTG 
GCCAAGCTGG AACGGGCGGG GCTGATCGCC GGTCGCCAGG TCATCCAGCA CGACCGTCCC 
AACAAGCGGC TGTTCACGGT CACCCCCGCC GGCCTCGCCG AACTGGCCGC CTTCGCCGCA 
GTGCCGTCGA AGCCCTCGTC CATTCGGGAG GATCTGCTTG TCATGGTCCA GGCCGTTGAC 
CGGCTCGACC CGGCACCGGT CATCGCCCAG CTCGAGGAGC GCGCGGGCAT CGCCGCTGCC 
AAGGTGGAAC TCTTTGACCG GACGCTCCGG CAGCTGCGCG GTGACCTGAC CGAGGAGACG 
TTCCTGCGCG AGAGTGACCA GATCGGGCCG TACCTCACCT GCCTGCGGGG GCGTCGCTTC 
GAGCAGGAGA ATCGTGAGTG GTGTGAGTGG GTGGCGGCCC TGCTCCGCGC CCGCGCGCCA 
GTGCCAGGTT GA
 
Protein sequence
MPARRHPSSL GVGGLTMALR HAVLAVLLDG EYSGYQLAKI FDVSFSNFWY AVPQQLYAEL 
AKLERAGLIA GRQVIQHDRP NKRLFTVTPA GLAELAAFAA VPSKPSSIRE DLLVMVQAVD 
RLDPAPVIAQ LEERAGIAAA KVELFDRTLR QLRGDLTEET FLRESDQIGP YLTCLRGRRF 
EQENREWCEW VAALLRARAP VPG