| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2551 |
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| Symbol | |
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| ID | 5059014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2870542 |
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| End bp | 2872146 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474807 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001159373 |
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| Protein GI | 145595076 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.547739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGT CCGCAGACCC CGTTGACGCC GTACCACTCG ACGGGGCGCC CACCTCGGCC
CCCTCCGATG TCAAGCCCAC GTCACCGGGT GCTGTTGTCG ACGCTGCCCA GGCGTACCTG
CTCGCCAACG GCTCGGTCGA CCACTACCGA CAGTCGCTCG TCGACGGGGT GGAGCGGGTG
GCCCGTCGCG TCGCCGCGGT CGATCGACCC TTCACCGGAG TCACCCCGGA CGAGTTGGCC
CCGCTCGTCG GCGGCATCGA GCTCGACCGG CCGCTCGGCG ACCACATCAC CGCCCTGAAC
GAGTTGGACG AGCTGTGGCT ACGCGACGCG GTCTGGTTTC ACCACCCCCG CTCCCTGGCC
CACCTCAACT GCCCGGTGGC AATCCCCGCG CTGCTTGGCG AGGCGATGCT CACCGCGGTC
AATCCGTCGC TGGACACCTG GGACCAGAGC GCTGGCGCCA CCTTCATCGA GCGCCGGTTG
ATCGAGTGGA CGGCCACCCG CATCGGTCTC GGACCGACCG CCGACGGGAT CTTCACCAGC
GGTGGAACCC AGTCCAACCT GCACGCCCTG CTGCTGGCCC GGGAGGAGGC CGTCGCCCAC
GCCGTCGATG CCGACGCCCG TGCCGCGCTG CTGCCCCGGC TGCGGATCCT CACCTCCTCC
GCCGGGCACT TCAGCGTCCA GAAGGCCGCG AAACTGCTCG GACTCGCGCC GGACGCGGTG
ATCACCGTCG AGACCGACGC GGCCCGGCGG ATGTGCCCGC AGGCGCTGGA CCGGGAACTG
GAGCGTTGCC AGCGGGCCGA CCTGCCGGTG ATGGCGGTGG TCGCCACCGC CGGTACCACC
GATTTCGGCA CCATCGACCC GCTGCCGGAG CTCGTCGGGC GCTGCGCCGC CGCGGGCGTC
TGGCTGCACG TCGACGCCGC GTACGGCTGC GGCCTGCTGG TCTCGCCGAC CCGCCGGCAC
CTGCTCGACG GCATCGAGCA GGCCGACTCG GTGACCGTCG ACTACCACAA GTCCTTCTTC
CAACCGGTCA GCTCCAGTGC GCTGCTGGTC CGGGACCGCC AGGTACTGCG GCACGCCACC
TACCACGCCG ACTACCTCAA CCCGGCCCGG GCGGTCGCCG AGCGCATCCC GAACCAGGTG
GACAAGAGTC TGCAGACCAC CCGCCGGTTC GACGCGCTGA AGTTGTGGTT GACCCTGCGG
GTGATGGGAC CGGACGCGAT CGGCGCGCTC TTCGACGAGG TCTGCCTCCG CGCCGTCGAC
GCCTGGGCCC TCGCCGACGC CGACCCCCGC TTCGAGGTGG CCGCCCGCTC ACCGCTGAGC
ACCGTCGTCT TCCGCTGGTG CCCCGCCGGC ACCGACGCCG AACTGGCCGA CGAGGCCAAC
CGGCACGCCC GCGCCCAACT CACCGCCTCC GGTGCCGCCA TGGTGGCCGG CACCATGGTC
GACGGCCGGG CGCACCTCAA GTTCACCCTG CTCAATCCCG CGACCACGAG CGCCGACGTG
ACCCTCGTGC TGGACCTGAT CGCCGAACAC GCCGGCCGGT ACGCGCACGA CCACGCCTCC
GAGCAAAGTG ACCGCCCCGC CGACCTGTCC TGCTCGGTCG CCTGA
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| Protein sequence | MNPSADPVDA VPLDGAPTSA PSDVKPTSPG AVVDAAQAYL LANGSVDHYR QSLVDGVERV
ARRVAAVDRP FTGVTPDELA PLVGGIELDR PLGDHITALN ELDELWLRDA VWFHHPRSLA
HLNCPVAIPA LLGEAMLTAV NPSLDTWDQS AGATFIERRL IEWTATRIGL GPTADGIFTS
GGTQSNLHAL LLAREEAVAH AVDADARAAL LPRLRILTSS AGHFSVQKAA KLLGLAPDAV
ITVETDAARR MCPQALDREL ERCQRADLPV MAVVATAGTT DFGTIDPLPE LVGRCAAAGV
WLHVDAAYGC GLLVSPTRRH LLDGIEQADS VTVDYHKSFF QPVSSSALLV RDRQVLRHAT
YHADYLNPAR AVAERIPNQV DKSLQTTRRF DALKLWLTLR VMGPDAIGAL FDEVCLRAVD
AWALADADPR FEVAARSPLS TVVFRWCPAG TDAELADEAN RHARAQLTAS GAAMVAGTMV
DGRAHLKFTL LNPATTSADV TLVLDLIAEH AGRYAHDHAS EQSDRPADLS CSVA
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