| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2526 |
|---|
| Symbol | |
|---|
| ID | 5058989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2839631 |
|---|
| End bp | 2840242 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474783 |
|---|
| Product | cob(I)yrinic acid a,c-diamide adenosyltransferase |
|---|
| Protein accession | YP_001159349 |
|---|
| Protein GI | 145595052 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2109] ATP:corrinoid adenosyltransferase |
|---|
| TIGRFAM ID | [TIGR00708] cob(I)alamin adenosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00173055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGG GGAAGCCGAC GCACGTGCCG GCCGACGGGC TCACGACCAA GCAGCGACGG
AACCGCCCAT TGTTGATCGT CCACACCGGA TCGATGAAGG GGAAGTCCAC CGCCGCCTTC
GGTCTCGCGC TGCGTGCCTG GACCGCGGGA CTACCGATCG GGGTGTTCCA GTTCGTCAAG
AGCGCCAAGT GGCGGGTGGG AGAGGAGAGC GCGTTCCGCG CCCTCGGCGA GGTGCACGAG
CAGACCGGTC AGGGTGCTCC GGTGAGCTGG CACAAGATGG GTGAGGGCTG GTCGTGGATC
CAGCGCGACG GTGCGGCCGA CCACGCCGCC GACGCCCGCG AGGGATGGCG GCAGATCCAG
CGCGACCTGA CCGCCCAGCG GTACGGCCTC TACGTGCTCG ACGAGTTCAC CTACCCGATG
AGGTGGGGCT GGGTGGACGT CGCCGAGGTG GTCGACACCC TCGCCGCCCG ACCCGGCTTT
CAACACGTCG TCATCACCGG TCGCGATGCC GACCCCCGCC TGGTGGCCGC CGCCGACCTG
GTGGCCGAGC TGACCAAGGT GAAGCATCCG ATGGACGCCG GCCAGAAGGG CCAGAAGGGC
ATCGAATGGT GA
|
|---|
| Protein sequence | MPQGKPTHVP ADGLTTKQRR NRPLLIVHTG SMKGKSTAAF GLALRAWTAG LPIGVFQFVK
SAKWRVGEES AFRALGEVHE QTGQGAPVSW HKMGEGWSWI QRDGAADHAA DAREGWRQIQ
RDLTAQRYGL YVLDEFTYPM RWGWVDVAEV VDTLAARPGF QHVVITGRDA DPRLVAAADL
VAELTKVKHP MDAGQKGQKG IEW
|
|---|
| |