| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2514 |
|---|
| Symbol | |
|---|
| ID | 5058977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2826633 |
|---|
| End bp | 2829050 |
|---|
| Gene Length | 2418 bp |
|---|
| Protein Length | 805 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640474772 |
|---|
| Product | adenylyl cyclase class-3/4/guanylyl cyclase |
|---|
| Protein accession | YP_001159338 |
|---|
| Protein GI | 145595041 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.255798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.832187 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA TGTTGAACGT CACCGCTGGG CCCCGCCCGG TCGCCGACCG GATTCCCAGC
ACTCCCCCTC ACACCCCACG AGTCGGCGCC GACGCACTCG GCCGATGGCC GGTTCCCGAG
GAGAGGCGCA CAGTCAGCGT CCTCTTCGCC GACATCGTCG GATCGACCCG GCTGGTCGAC
CAGCTCGACC CCGAGGAGGT ACGGGCCCTG CAACGGGCCT ACTTCGACAC GGTGGCCCGG
GTGCTGCGCC GCTGGGGTGG AGTGGTGGAG AAGTACATCG GGGACGCGGT GATGGCGCTC
TTCGGCGCCA CGGAGTCCGA CGGCTTCGAC GCCTACCGTG CGGTACGGGC CGGCCTGGAA
ATCCAACGCT CGCTAGACCG GCGGACGCTT CCCGGGGTGC CGACACTGCG CGTACGGGTC
GGAGTGGCGA CCGGCGAGGC GGTGGTCGAC CTCACCACCA CCCACAACGG CGCGCACGGC
ATGGCCAGCG GCGCGGTCAT CACCCTCGCC GCCCGCCTCC AGACGTACGC CCCGCCGGGC
GGAGTCGTCC TCTGCACCGT CACCCACCAG GCAACCAACA GGCTGATCGA TCAACGTCCG
GTGCCCGCGG TGGCGGTCGT CGGAAAGTCG CTACCCATCG AGGTCTGGCA CGCCACCGGC
CCGGCCCGGC CCAAGCCGAC GCGGCACTGC GGGCCGCTGA TCGGGCGACG CGGGGAGCTC
GCCGCCGCCC GGGCCCAGCT GGTGCGCGCG GTGCGGGACC GCCGGCCCCG TTGGGTCTCG
GCGACCGGCC CGACGGGCAG CGGACGCAGC CGGCTACTCC ACGAGTTGGT GCGCGTGGTC
CCCACAATCG ACGGAGCCTC GGTCCACTGG TGTGTGGCGG CGTGCCCGCC GTATCCGGAG
CAGCCACTGG CACCCGTGGC CGAACTGGTC CGTGCCTTCG CCGGGATCGG TGACCAGGAT
CCGACCCCGG TAGTCCGGGC CCGGCTCACC TCCGCCGTCG CCGCGGTGGT CCCGCCGGCA
CGCCGCACCG AGGTGGTGTC CGCGCTGCAG GAGCTGCTGG AGGAGCCGGA CACCAGCGTC
ACCGCCCATC GGGGGGTGGC GAGGTGGCAG GAGTGCCTGC TCGGCCTCGC CGAGCGGCAG
CCAGTGGTGG TGGCGGTTGA CGACCTCGAC CGCGGCGCCC CGGAGGTGAG CCGCTTCCTG
CACCGGCTGC TCGCCGCAGC CCGAATCCGG GCACTGCCCC TCGCGGTGAT CGCCCTGCAC
GGTCCGGAGC CGACGACCGC GCGGCTCATC GGGGGCCGAC GGGAGGGGCT GCCGCTGCAC
CGCTTGTCGA CCAGGGAATC CGAACGGCTG CTGCACCACC TGCTGCACCA GGCCGGCCAG
CCGGCTGCGC TCGCCAAGGT GCTGCTACCG CTGGTCCGCG GCCTCCCCGG GCGAGCCGCC
GCATATGTGG CGTCGCTGGC CCCCGGCTCC GCACCACCGG TTCCCGATCC GATCCGCCGT
GCCCTCGACA CGCGGCTCGA CCAGTTGGAC GGCACCCGGC GGGCAGTGTT GATGGCCGCC
GCTGCCATCG GGACACCCGT CACACCGGTG CTGCTGGACC GCGTACTCGG CTGGGCACCG
GGCCGGGCGG TCGCGGCGCT ACACGATCTG ACACATCAGG ACCTGCTGGC CGCAGGGCCG
AACGGCTACA CCGTGCCGGA CCCGGTGGTC GCCTCCGTCG CCGCCGCTCG GCTCACCCGG
GCGGTCCGGA CCGAGTGGCG CACCCGCGCA GCCGCCCCGG CCGGCTCAGG CCCCGTTCAG
GGTGCGGCTA CGGCCACGGA ACTCGGCGAT CACCGCACCA TCGTCCCGGG TCACGGTGAC
GTCGTAGATC CCGCTGCGGC CGTACCGGAT GCGTTCGGCG GCCCGAGCAA GCAGCACATC
CCCCTCGCGC GCCGGCCGGA CAAAGACAAT GTCTCCGCCG GCCGCGACCG TCACCGGGCC
GTGGCTGTTA CAGGCCAACG CGAACGCGGT GTCGGCGAGC AGGAACAGGT AGCCGCCGTG
GGCGATGCGG TGCCCGTTGA CCATCGCCCC GGTCACCCGC ATCCGGGCCA CCGCCGCGCC
CGCCGCCGCC TCGATCAGCT CGATGCCGAG CGCACGCGAG GCGACATCGG CAGCGAACAT
GTCGTACGCG GCGTTGCGCC GCTGCGGGTC CGGCACCGGA CGTTGACCGG ACCCGTCCGG
CTCCGGCGCC GTCGCCCTCT TCCGCCCGGT CGACTCCCGC CGGTCCCGGT GGGGCGGACG
ATCCGACATC GCCGCTCTCC TCACTACGCC GGACGAACAA TTCGACGATC TTGCCACCGT
ACGTCACCGC CCCGGGTCCG GCATCACCGA GACCCGGCCG CACCACGCTG CCGCGTGGCC
GCGTCGCCCC GCCGATAG
|
|---|
| Protein sequence | MPAMLNVTAG PRPVADRIPS TPPHTPRVGA DALGRWPVPE ERRTVSVLFA DIVGSTRLVD
QLDPEEVRAL QRAYFDTVAR VLRRWGGVVE KYIGDAVMAL FGATESDGFD AYRAVRAGLE
IQRSLDRRTL PGVPTLRVRV GVATGEAVVD LTTTHNGAHG MASGAVITLA ARLQTYAPPG
GVVLCTVTHQ ATNRLIDQRP VPAVAVVGKS LPIEVWHATG PARPKPTRHC GPLIGRRGEL
AAARAQLVRA VRDRRPRWVS ATGPTGSGRS RLLHELVRVV PTIDGASVHW CVAACPPYPE
QPLAPVAELV RAFAGIGDQD PTPVVRARLT SAVAAVVPPA RRTEVVSALQ ELLEEPDTSV
TAHRGVARWQ ECLLGLAERQ PVVVAVDDLD RGAPEVSRFL HRLLAAARIR ALPLAVIALH
GPEPTTARLI GGRREGLPLH RLSTRESERL LHHLLHQAGQ PAALAKVLLP LVRGLPGRAA
AYVASLAPGS APPVPDPIRR ALDTRLDQLD GTRRAVLMAA AAIGTPVTPV LLDRVLGWAP
GRAVAALHDL THQDLLAAGP NGYTVPDPVV ASVAAARLTR AVRTEWRTRA AAPAGSGPVQ
GAATATELGD HRTIVPGHGD VVDPAAAVPD AFGGPSKQHI PLARRPDKDN VSAGRDRHRA
VAVTGQRERG VGEQEQVAAV GDAVPVDHRP GHPHPGHRRA RRRLDQLDAE RTRGDIGSEH
VVRGVAPLRV RHRTLTGPVR LRRRRPLPPG RLPPVPVGRT IRHRRSPHYA GRTIRRSCHR
TSPPRVRHHR DPAAPRCRVA ASPRR
|
|---|
| |