Gene Strop_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2398 
Symbol 
ID5058861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2693007 
End bp2693540 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID640474657 
Producthypothetical protein 
Protein accessionYP_001159223 
Protein GI145594926 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.796069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAGGT CTGGGTATAT CGCCTCCGCG ACGACGAGCG GGGTCGGCAC CCAGAACCGG 
AACGAACCGG GTCCGGAACA GGCGATCGTA GCGGATGATC GGGGCGTGGA ACCACAACCC
GAGCGCGGCC ACCGCTGCCT GCCGCACACC GCCGACGTAC GCATCGAGGC ATGGGCGCCG
ACGCGGGAGG CGTGCGTGGC CGAGGCGGTC ACCGCCCTGG TGGACACCTT CGTTGACCCT
GGCCCCGCGC AACCCACCGC CGAACGGGCC TACCGCGCCC CCGCGGCCGA GGATGGAGAC
CTTCTGGTGA ACATCCTCGA GGAGGTGATC TTCCGGATGG AGACCATGGG CGAGCTGCCA
CTGCGTACCG AGGTTCACGA CGACGGCACC GACGGGCTAC ACGTACGCTG GCAGACCACC
GACGCCGACA CAGTGGAGCT GATCGGTGCC GTGCCGAAAG CCATCTCCCT GCACGAACTG
CGCTTCGGCC CCGACGGTCC CCGCTGGTCC TGCGCGCTCA CCGTCGACGT CTGA
 
Protein sequence
MNRSGYIASA TTSGVGTQNR NEPGPEQAIV ADDRGVEPQP ERGHRCLPHT ADVRIEAWAP 
TREACVAEAV TALVDTFVDP GPAQPTAERA YRAPAAEDGD LLVNILEEVI FRMETMGELP
LRTEVHDDGT DGLHVRWQTT DADTVELIGA VPKAISLHEL RFGPDGPRWS CALTVDV