Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2341 |
Symbol | |
ID | 5058804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2635489 |
End bp | 2636256 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474601 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001159167 |
Protein GI | 145594870 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0083656 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTGACCG GCCCGTGCCC CTACCTCGAC ACGCCAGCGC CGTTGGCCTT CGCCCACCGT GGCGGCGCCG CCGAGGGCGA CGAGAACACG GCTGCGGCGT TCGCCCGGGC TGTCGGCCTG GGCTATCGGT ACGTCGAGAC CGATGTGCAC GCTACCGCCG ACGGTGTGGC GGTGGTCTTC CACGACCCCA CGCTGCACCG GATCACCGGC TCCCCCGGAC GGATCGCCGA GCTGCGGTGG GCCGATCTGG CGTCGGTGCG CGTCGGTGGC GCGTCGGTGG TGCCCCGCCT GGACGAGGTG CTACACGCCT GGCCGCAGGT CCGGTTCAAC GTTGATGTCA AGGCCGGCTC CGGCATCGAG CCGGCGGTGG CCGCCATCGA GCGCGCTGAC GCCGGAGATC GGGTTCTGTT GGCCTCCTTC AGCGACGCGC GGCTGGTCCG GATGCGGGCG TTGACCCGGG GCCGAATCGC CACCAGTCTC GGCGTGCGAG GCGTGGCGCG ACTGCGGATG GCGTCGTTGA CGGGCCGGCT GCTGCGGCTG CCGGAGTCGG TGGTCGCCGC GCAGGTGCCG GTGCGGTACG GGCGGCTGCG GGTCACCGAC CGCCGGTTTC TCGCCTACTG CCACCGCCTC GGGCTGCAGG TGCATGTCTG GACGATTGAC GAACCCGCCG AGATGCACGA GTTACTGGAC CTCGGGGTGG ATGGCATCAT GACCGATCAC GTGGACGTGC TACGTGACGT CTATCGCAGT CGCGGTCACT GGGCCTGA
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Protein sequence | MLTGPCPYLD TPAPLAFAHR GGAAEGDENT AAAFARAVGL GYRYVETDVH ATADGVAVVF HDPTLHRITG SPGRIAELRW ADLASVRVGG ASVVPRLDEV LHAWPQVRFN VDVKAGSGIE PAVAAIERAD AGDRVLLASF SDARLVRMRA LTRGRIATSL GVRGVARLRM ASLTGRLLRL PESVVAAQVP VRYGRLRVTD RRFLAYCHRL GLQVHVWTID EPAEMHELLD LGVDGIMTDH VDVLRDVYRS RGHWA
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