Gene Strop_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2341 
Symbol 
ID5058804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2635489 
End bp2636256 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID640474601 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001159167 
Protein GI145594870 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0083656 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTGACCG GCCCGTGCCC CTACCTCGAC ACGCCAGCGC CGTTGGCCTT CGCCCACCGT 
GGCGGCGCCG CCGAGGGCGA CGAGAACACG GCTGCGGCGT TCGCCCGGGC TGTCGGCCTG
GGCTATCGGT ACGTCGAGAC CGATGTGCAC GCTACCGCCG ACGGTGTGGC GGTGGTCTTC
CACGACCCCA CGCTGCACCG GATCACCGGC TCCCCCGGAC GGATCGCCGA GCTGCGGTGG
GCCGATCTGG CGTCGGTGCG CGTCGGTGGC GCGTCGGTGG TGCCCCGCCT GGACGAGGTG
CTACACGCCT GGCCGCAGGT CCGGTTCAAC GTTGATGTCA AGGCCGGCTC CGGCATCGAG
CCGGCGGTGG CCGCCATCGA GCGCGCTGAC GCCGGAGATC GGGTTCTGTT GGCCTCCTTC
AGCGACGCGC GGCTGGTCCG GATGCGGGCG TTGACCCGGG GCCGAATCGC CACCAGTCTC
GGCGTGCGAG GCGTGGCGCG ACTGCGGATG GCGTCGTTGA CGGGCCGGCT GCTGCGGCTG
CCGGAGTCGG TGGTCGCCGC GCAGGTGCCG GTGCGGTACG GGCGGCTGCG GGTCACCGAC
CGCCGGTTTC TCGCCTACTG CCACCGCCTC GGGCTGCAGG TGCATGTCTG GACGATTGAC
GAACCCGCCG AGATGCACGA GTTACTGGAC CTCGGGGTGG ATGGCATCAT GACCGATCAC
GTGGACGTGC TACGTGACGT CTATCGCAGT CGCGGTCACT GGGCCTGA
 
Protein sequence
MLTGPCPYLD TPAPLAFAHR GGAAEGDENT AAAFARAVGL GYRYVETDVH ATADGVAVVF 
HDPTLHRITG SPGRIAELRW ADLASVRVGG ASVVPRLDEV LHAWPQVRFN VDVKAGSGIE
PAVAAIERAD AGDRVLLASF SDARLVRMRA LTRGRIATSL GVRGVARLRM ASLTGRLLRL
PESVVAAQVP VRYGRLRVTD RRFLAYCHRL GLQVHVWTID EPAEMHELLD LGVDGIMTDH
VDVLRDVYRS RGHWA