| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2275 |
|---|
| Symbol | |
|---|
| ID | 5058738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2570298 |
|---|
| End bp | 2570786 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474537 |
|---|
| Product | AsnC/Lrp family regulatory protein |
|---|
| Protein accession | YP_001159103 |
|---|
| Protein GI | 145594806 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.444267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0654851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATC GCGCGGCAAG ACCCCCTAGT GGCCTTCCAG ATGGCAACTC GTTGCTCGAC
GACACCAATC GCAGCCTGCT CCACGCCCTG CGGGACGATC CACGCGCCAG CGCCGCCGAG
TTGGCGCGCC AGGTCGGCAT GTCCGCGCCG GCGGTGCGGG AGCGTCTTCA CCGGCTCGAA
CGCGCCGGCG TCATCCGTGG CTATCGCGTC GATATCGACC CCGCGGCGCT GGGTCTACCT
GTCGCCGCCT GGGTGCGGAT CCAACCCGGT CCAGGGCAGC TGCCGAAGAT CGCAAACCTG
GCCGCCCGCA CTCCCGAGGT CAGTGAGTGT CACCGGATCT CCGGTGAGGA CTGCTTCCTG
CTCAAGGTGC ACGTGGCCGC GGTCGACGCC CTGGCCGCGG TCCTCGACCA GTTCCTGCTC
TACGGCCAGA CCACCAGCTC CTTCATCGTC TCCACACCGG TGGCACCGCG CACGCCGGAA
CAACGCTAA
|
|---|
| Protein sequence | MTHRAARPPS GLPDGNSLLD DTNRSLLHAL RDDPRASAAE LARQVGMSAP AVRERLHRLE
RAGVIRGYRV DIDPAALGLP VAAWVRIQPG PGQLPKIANL AARTPEVSEC HRISGEDCFL
LKVHVAAVDA LAAVLDQFLL YGQTTSSFIV STPVAPRTPE QR
|
|---|
| |