Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2256 |
Symbol | |
ID | 5058719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2548878 |
End bp | 2551685 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474518 |
Product | DSH domain-containing protein |
Protein accession | YP_001159084 |
Protein GI | 145594787 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.765389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCGTA CCGGCGCGGC ACGCACTAAT CTTGGTCCCA TGTCGAGCCC TGCCGAGCGG TACGCCGCGG CACGCCGCCG GGCCGCGCAG GCCCCCCTGT CCCCGGCGTT GGACGAGTTC GCCCTCGACC TCGGTGTCGA CCTCGACGAT TTCCAGCGGG AGGCGTGTCA GGCGTTGGAG CGCGGCAGCG GGGTCCTGGT CTGCGCCCCC ACCGGCGCCG GCAAGACGGT CGTCGGTGAG TTCGCCGTCC ACCTGGCACT GCGGGGTGGA ACCTCGGCCG ACACGGGCCG CCGCAAGTGT TTCTACACCA CCCCGATCAA GGCGTTGTCA AATCAGAAGT ACCACGATCT CGTCGACCGG CACGGCGCCG ACCAGGTCGG GCTGCTCACC GGCGACAACG CGATCAACGG CGATGCGCCC GTGGTGGTGA TGACCACCGA GGTACTGCGC AACATGCTCT ACGCCGGTTC GGCGACCCTG GAGGGGCTGG CGTACGTGGT GATGGACGAG GTGCACTACC TCGCCGACCG GTTCCGCGGT GGCGTGTGGG AGGAGGTGAT CATCCACCTG CCCGCCTCGG TCACGCTGGT GTCGCTGTCG GCGACGGTGT CCAACGCGGA GGAGTTCGCC GACTGGCTGG TCACCGTGCG GGGCGAGACC GAGGTCGTGG TCAGCGAGCA CCGGCCGGTG CCGTTGTGGC AACACATGCT CGTTGGCCGG CGGATGTTCG ACCTGTTCCA CGACGCCGAT GCCGCGCGCA AACACGATGT GCATCCGGAG TTGCTGCGCT ACACCCGGGA CACGCTGCGC CGCCTCGAGT CGGGGGAGGG ACGCGGTGCC GGCCCGGGTG GTCGGCGTGG GCCGCGCTGG CGGGGGCCGA TGCGTCCGGA CATCGTTGAT CGGCTCGACC GGGAGGGGTT GCTGCCGGCG ATCCTGTTTA TCTTCAGCCG TGCCGGCTGC GACGCGGCGG TACAGCAGTG TCTCGCCGCC GGACTGCGGC TCACCGGCCC GGAAGAGCGG GCCGAGATCC GCCGGGTGGT GGAGAGCCGG ATCACCACGA TCCCCGGCGA AGACCTGTCG GTGCTCGGCT ACTGGGACTG GCTGGACGGG CTGGAGCGGG GCCTCGCCGC GCACCACGCC GGCATGCTGC CGGCGTTCAA GGAGGTCGTC GAGGAGCTGT TTGTCCGCGG GCTGGTGAAG GCGGTGTTCG CCACCGAGAC CCTTGCGCTG GGCATCAACA TGCCGGCCCG CTGCGTGGTG TTGGAACGCC TGGTCAAGTA CAACGGCGAG GCCCACGTGG ACCTGACGCC CGGCGAGTAC ACGCAGCTCA CCGGCCGAGC CGGCCGCCGC GGTATCGACG TGGAGGGGCA CGCCGTGGTG GTCTGGTCGC CGGAGACCGA CCCGCGGCAC GTGGCCGGTC TCGCATCCAC CCGTACGTAC CCGCTGCGGT CGAGTTTCCG GCCGTCGTAC AACATGGCCG TCAACCTGGT GGGCAGCGTG GGCGCGGAGC CAGCCCGGGC GTTGCTGGAG TCCTCCTTCG CGCAGTTCCA GGCGGACCGG TCGGTGGTGG GGCTGGCGCG GCAGGTCCAG CGCAATACCG AGACGGTTCA GGCGTACGGC GCGGAGGCGG CCTGCCAGCA CGGTGACTTC GACGCCTACT TCGCGATCCG GGTGGCGATC GCCGACCGGG AGCGGGAGCT GGCCCGGCAG GGGCAGAGCC AGCGGAAGGC GGCGGCGGTC GTCTCGCTGG AGCGGCTGCG GGTCGGCGAC GTGATTCGGG TGCCGTCCGG CCGGCGGGCT GGCCTTGCGG TGGTGCTGGA CCCGGCGGCC GCCGGCTTCG GGGAGCCCCG TCCGTTGGTT CTGACCCAGG ATCGCTGGGC GGGCCGGGTC GGCCCGGGCG ACTTCACCAC TCCGGCGGAG GTACTCACCC GGATTCGGGT GCCAAAACAC TTCAATCACC GCTCCCCGGC CGCGCGACGG GACCTGGCCG CCGCGGTCAG CGGAACCGGG TTGAACCGGC ACGGCGGCCG GCGGGGCGGC CGGTCGCGGC GCGGTGCTGG GGAGGATGAC CGGCTCGTGC AGCTCCGCGC CGAGCTGCGC CGCCACCCGT GCCACGCCTG CCCGGAGCGG GAGGAGCACG CCCGCTGGGC GGAGCGTCGC CGCCGGTTGG AGAAGGACAC CCAGGAGCTG CGGCAGCGGG TGACGGGCCG TACCGGCTCC TTGGCCCGCA CCTTCGACCG GATCGTGGCG TTGTTGACGG CCCGCGGCTA CCTCGCCTCC GACGGGGGCG TCACCGACGC CGGTCGGATG TTGAGCCGGA TCTGGACGGA GGCGGACCTG CTGGTCGCTG AGTGCCTGCG TCGTGGCGTG TGGAGTGGGC TCAGTCCGGC CGAGTTGGCG GCGGCGGTGT CGGTGGTGGT CTTCGAGGCC CGCCGGGACG TTGACGAGCG CGCATCGCTG CCGCGGGGCG CGGTGGCGAC GGCGGTCGAC GAGACGTTGA AGCTGTGGGG GGAGATCGAG GCCGACGAGG CGGCACAGGG GTTGACCGTG ACCCGGGAGC CGGATCTCGG CTTCGCCTGG CCGGTCTACC GCTGGGCCCG CGGGGAACCA CTCGCGAAGG TCCTCGTCAG CGGCCACATC GATGGCGAGA TGCCGGCCGG CGACTTCGTC CGCTGGGCTC GGCAGGTGGT GGACCTGCTC GGTCAGCTGG CCGATTCCGG CGGCGCCTCG GCTGAGCTGC GCAGCACCGC ACGACAGGCC ATCGTCGCGG TGAACCGTGG GGTGCTCTCC TACCAGGCCA CCGCCTGA
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Protein sequence | MGRTGAARTN LGPMSSPAER YAAARRRAAQ APLSPALDEF ALDLGVDLDD FQREACQALE RGSGVLVCAP TGAGKTVVGE FAVHLALRGG TSADTGRRKC FYTTPIKALS NQKYHDLVDR HGADQVGLLT GDNAINGDAP VVVMTTEVLR NMLYAGSATL EGLAYVVMDE VHYLADRFRG GVWEEVIIHL PASVTLVSLS ATVSNAEEFA DWLVTVRGET EVVVSEHRPV PLWQHMLVGR RMFDLFHDAD AARKHDVHPE LLRYTRDTLR RLESGEGRGA GPGGRRGPRW RGPMRPDIVD RLDREGLLPA ILFIFSRAGC DAAVQQCLAA GLRLTGPEER AEIRRVVESR ITTIPGEDLS VLGYWDWLDG LERGLAAHHA GMLPAFKEVV EELFVRGLVK AVFATETLAL GINMPARCVV LERLVKYNGE AHVDLTPGEY TQLTGRAGRR GIDVEGHAVV VWSPETDPRH VAGLASTRTY PLRSSFRPSY NMAVNLVGSV GAEPARALLE SSFAQFQADR SVVGLARQVQ RNTETVQAYG AEAACQHGDF DAYFAIRVAI ADRERELARQ GQSQRKAAAV VSLERLRVGD VIRVPSGRRA GLAVVLDPAA AGFGEPRPLV LTQDRWAGRV GPGDFTTPAE VLTRIRVPKH FNHRSPAARR DLAAAVSGTG LNRHGGRRGG RSRRGAGEDD RLVQLRAELR RHPCHACPER EEHARWAERR RRLEKDTQEL RQRVTGRTGS LARTFDRIVA LLTARGYLAS DGGVTDAGRM LSRIWTEADL LVAECLRRGV WSGLSPAELA AAVSVVVFEA RRDVDERASL PRGAVATAVD ETLKLWGEIE ADEAAQGLTV TREPDLGFAW PVYRWARGEP LAKVLVSGHI DGEMPAGDFV RWARQVVDLL GQLADSGGAS AELRSTARQA IVAVNRGVLS YQATA
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