| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2233 |
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| Symbol | |
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| ID | 5058696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2525217 |
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| End bp | 2527766 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474495 |
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| Product | hypothetical protein |
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| Protein accession | YP_001159061 |
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| Protein GI | 145594764 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.107477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGGG CGACCCTCAA GAGCCTGCTG GCGCGAAAGC TCCGGCTGAT CCTGTCCGGG
TTGGCGGTGG TGCTCGGCGT CATGTTCGTC TCGGGCGCGT TCGTGCTCAC CGACACCCTC
GGCCGCTCCT TCGACGCCGT CTTCGCCGAC GCGTACGAAG GGGTGGACGT CAACGTCTCC
GCGACGTCAC AGATGGAGGT GAGTGACTTC GAGGGCGAGC CGGTGGCGGC GCCGGTGCCG
GCCGAGACGG TGGAACGGAT CCGGGGCGTC GACGGAGTGG CCGACGCCAC CGGCATCGTG
GCCGCCGACG GCGCGCGCCT GATCGGCAGC AATGGCAAGG TGGTCACCTC CTTCGGGCCA
CCCCAGCTCG GTGAGAACTG GGTGGGCGTG AGCGATCTCG TGCAGCTGCG CGAGGGCCGG
GAGCCGCAGG CGGACGACGA GATCGTCGTC AACGCCGGCC TGGCCAAGGC CGGCCGGGTC
GCGGTCGGCG ACCGGGTGGG CGTGCTCACG CTCGAGCCGA AGCAGGAGTT CACCATCGTC
GGGATCTTCG GCTACAGCGG AGGCCGCGAC TCCCTCGGCG GCACCAACGA GATCATGTTC
ACCACTCCGG TGGCGCAGCA GCTGATGCTC GGCCAACGCG ACGCCTTCAC CAATGTCACG
GTCACCGCCG CCGACGGCGT CTCCAACGAT CGGCTGCGCG ACGACATCGC CGCCGCGCTC
GGGACCGACT TCGAGGTGAA GACCGGCACC CAGCTCTCCG CCGACGCCTC GGCGACGCTG
AAGGAGGGGC TGTCCTTCTT CAACCGAATC CTGCTCGGCT TCGCCGCGGT GGCGCTGTTG
GTGGGCACGT TCCTGATCCT CAACACGTTT TCGATCATCG TGGCGCAGCG CACCCGGGAG
TTGGCGCTGA TGCGCGCCGT CGGGGCGGGC CGCCGCCAGA TCATCGGCTC GGTGGTGCTG
GAGGCGGTGG CGGTCGGCCT GCTCGCCTCC GTGCTCGGCC TCGGTGCCGG CGTCGGCGTC
GGCGCGCTGT TGGCGTACCT GTTCGGAAAC CTCTCCGGCG GGCTGGACCT GGCGGGGATA
GCCGTGCCCC CGGCGGCGGT CATCGCGGCG TTCGGAGTCG GCCTGGTCAT CACGGTGGTG
GCGGCGCTGC TGCCCGCGCT GCGGGCGTCC CGGATCCCGC CGATCGCCGC GATGCAGGAT
GTCGCGACGC CGGACCGGCC GCTGACCAAG GTCACGATGG CGGGCGCGGC GGTGACCCTG
GCCGGCGCCA CGCTGCTCTT CCTTGGCCTC GGCGGGCATG CCGGCGGCAA CACCCTGAGC
ACCATCCTCG GTGGGGTACT TCTCGCCTTC ATCGGGGTGG CGCTCCTGAC TCCGTTGGTC
AGCCGGCCGG TGGTCGGTCT ACTGGGTGGA ATCTTCTCCT GGTGGATGCC GGGCAAGCTG
GGCCGACTCA ACTCCGGACG TAACCCGCGC CGCACGGCGA TCACGGCGGC CGCGCTGATG
GTCGGCATCG CCCTGGTCAC CGGGGTCACC GTCATCCTGG ACTCCGCCAA GAGCAGCATC
AGCGGCCTGG CCCAGGACAC GATCAAGGCT GAGTTGGTGA TCGCCGGCAC GCAGACCTCA
GCCCGACCGC CCAGCTTCGA CCCGGCGGTG TTGGAGGAGT CGGCGGCTAT CCCCGGGGTG
GCGCTGGTCG GCGGCGCCTA CGGCGATCTC GCCCAGGTCG GCGACGAACG CACCTGGGTG
GGTGCCAACA GCGACGTGTC GACGCTGACG AAGATCTTCG GCGCGCGGGC CACCGCCGGG
GACATCAGTC GACTCGGGCC GGATCAGATG CTGGTCAGCT CGGACGTGGC GGCCTCACGC
GGACTCTCCG TCGGCTCGAC CGTGCCGGTG CAGCTCGCCC GTGCCGAGGC GAAAACCTAC
ACGGTCAGCG GGATCTACGA AGCCTCCGAG TTCCTCGACC CGATCACCTT GCCGGTCGTG
GCGACGCAGG GCTTCACCAT CCCCCAGCCG ATAGCGGGCT TCATCCAGCT CACGCCGGAC
GCCCAGGTCG CCGACGTGCT GCCACGGGTG GAGACGCTCC TGGCGGACAG CCCGGAGGTG
TCGGTGGCCG ACCGGGACGC GTTCATCCAG CAGCAGGCCA GTCAGTTCGA CAGCCTGTTG
CAAATGATCC AGATCCTGCT GCTGTTGGCC ATCGTGATCG CGGTGCTCGG CATCATCAAC
ACCCTGGCCC TGTCGGTGCT CGAACGCACC CGGGAGCTCG GGCTACTACG CGCGGTCGGC
CTTGGCCGGG CGCAGACGAT GGGCATGATC ACCATAGAGG CGGTGGTGAT CTCGGTGTTC
GGTGCGCTGC TCGGCATCGC CGTCGGCTCC GGCCTCGGCG CGGCCGTCGT CGAGGCGTTA
CGCGACGAGG GAATCACCGA CCTGGTGTTG CCCTGGGCGG ACATGGGGAC GATGGTCGGC
CTCGGCGCAC TCGTCGGCGT CCTCGCCGCG GTGATTCCCG CGGTCCGCGC CGCCCGCATC
GATGTTCTGG GCGCCATCGC CCACGACTGA
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| Protein sequence | MFRATLKSLL ARKLRLILSG LAVVLGVMFV SGAFVLTDTL GRSFDAVFAD AYEGVDVNVS
ATSQMEVSDF EGEPVAAPVP AETVERIRGV DGVADATGIV AADGARLIGS NGKVVTSFGP
PQLGENWVGV SDLVQLREGR EPQADDEIVV NAGLAKAGRV AVGDRVGVLT LEPKQEFTIV
GIFGYSGGRD SLGGTNEIMF TTPVAQQLML GQRDAFTNVT VTAADGVSND RLRDDIAAAL
GTDFEVKTGT QLSADASATL KEGLSFFNRI LLGFAAVALL VGTFLILNTF SIIVAQRTRE
LALMRAVGAG RRQIIGSVVL EAVAVGLLAS VLGLGAGVGV GALLAYLFGN LSGGLDLAGI
AVPPAAVIAA FGVGLVITVV AALLPALRAS RIPPIAAMQD VATPDRPLTK VTMAGAAVTL
AGATLLFLGL GGHAGGNTLS TILGGVLLAF IGVALLTPLV SRPVVGLLGG IFSWWMPGKL
GRLNSGRNPR RTAITAAALM VGIALVTGVT VILDSAKSSI SGLAQDTIKA ELVIAGTQTS
ARPPSFDPAV LEESAAIPGV ALVGGAYGDL AQVGDERTWV GANSDVSTLT KIFGARATAG
DISRLGPDQM LVSSDVAASR GLSVGSTVPV QLARAEAKTY TVSGIYEASE FLDPITLPVV
ATQGFTIPQP IAGFIQLTPD AQVADVLPRV ETLLADSPEV SVADRDAFIQ QQASQFDSLL
QMIQILLLLA IVIAVLGIIN TLALSVLERT RELGLLRAVG LGRAQTMGMI TIEAVVISVF
GALLGIAVGS GLGAAVVEAL RDEGITDLVL PWADMGTMVG LGALVGVLAA VIPAVRAARI
DVLGAIAHD
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