| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2194 |
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| Symbol | |
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| ID | 5058657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2483463 |
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| End bp | 2484248 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474457 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159023 |
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| Protein GI | 145594726 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0761637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA ACGAACAGCG AGTAGCGCTG GTCACCGGTG GAACCAGTGG AATCGGCTTG
GCGGTCGCGG AGACGCTCGC CCGCCGCGGC CTCAGGGTCT TTCTCTGCGC GCGAACTCCG
GAGGCCGTCG AGGAGACGGT CGGCAAGCTA CGGGCCGACG GCTACCCGGC CGACGGTGTC
GTCGCGGATG TCCGGCTCCA GGCCGATGTC GAGCGTCTCG TGGGCGTCGT CGTCCAGCGG
TACGGACACG TTGATGTCCT GGTGAACAAC GCCGGGCGCA GCGGCGGCGG GGTGACCGCC
ACCATCGCCG ACGAGCTCTG GTACGACGTC ATCGAGACCA ACCTGAACAG CGTCTTCCGG
GTCACCCGCG AGGTACTCCG GTCGGGACGG CTGCTGGAGC GCGGTTGGGG ACGAATCATC
AGCATCGCGT CGACCGGGGG CAAGCAGGGG GTGGTGCTCG CCGCGCCCTA CTCCGCGTCC
AAGCACGGAG TGGTCGGCTT CACCAAGGCG CTGGGGCTGG AGCTAGCGAA GACCGGGGTC
ACCGTCAACG CGGTCTGCCC CGGCTACGTC GAGACGCCGA TGGCGCAACG GGTACGGCAA
GGGTACGCCG CCCACTTCGA GACGACCGAA GCGGCGATCC TGGAGCGATT CCAGGCGAAG
ATACCGCTGG GCCGCTACTC CACCCCCGAG GAGGTAGCCG GACTTGTCGG ATACCTGGTC
AGCGATCTTG CCGCGCCGAT CACCGCGCAG GCGATCAACG TCTGTGGCGG TCTCGGAAAC
TACTGA
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| Protein sequence | MAENEQRVAL VTGGTSGIGL AVAETLARRG LRVFLCARTP EAVEETVGKL RADGYPADGV
VADVRLQADV ERLVGVVVQR YGHVDVLVNN AGRSGGGVTA TIADELWYDV IETNLNSVFR
VTREVLRSGR LLERGWGRII SIASTGGKQG VVLAAPYSAS KHGVVGFTKA LGLELAKTGV
TVNAVCPGYV ETPMAQRVRQ GYAAHFETTE AAILERFQAK IPLGRYSTPE EVAGLVGYLV
SDLAAPITAQ AINVCGGLGN Y
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