Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2184 |
Symbol | |
ID | 5058647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2471575 |
End bp | 2472402 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474447 |
Product | peptidase C26 |
Protein accession | YP_001159013 |
Protein GI | 145594716 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.297323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCAA CGTGGAACGA ATTCGAGGCA CGGCCAGTGA TTGGAATCTG CGCACGAACG GCCCCGGTGA CGGTGCAGGG GCTCGACATG ACAGTCAGCC TGGCGCTGCA GGCCCACGTG GACATGCTCG CCACCGCAGG GTGCACCCCC CTGTTGGTTC CACTGCTGCC GGGTGCCGAG GACCTCGTGC CACGACTCGA CGGCCTCCTG CTGCCCGGGG GGCCAGACCT GGACCCGGAG TTGTACGGGC AGCCCCAACA CTCCAGGACC TGGTGCGGCA GCACCGCCGC GGACCGGGTT GAACTGACCC TGCTCCGGGC AGCGCTTGAC GCCGGCCGGC CGGTCCTGGC CATCTGCCGC GGGATGCAGG TGCTCAACGT GTTGTCGGGA GGGACGCTGC ACCAGCACCT GCCCGAGGTC GTCGACCATG ATGGCCACTG CCCCCAGACC GCGACCTTCA CCCTCGGCTG GAACCGGCTC AACCTCCAGC CTGGCAGCCT CGCCGCCGCT GCCTACGGCA CCGATGTCCC GACTGTCGCC TGCCACCACC ACCAGGGTGT CGACCGGGTT GGTGCGGGTC TCTCCGTGAC CGCCCGGGCA TCGGACGGGG TCATTGAGGC GATCGAGGCG ACCGGGCACC CGTTCGTGCT CGGGGTGCAG TGGGAGGCCG GGCAGGACTC CGACTCGCGA CTGCACCGCG CGCTCGCCGA CGCCGCCGGA CGTACGAGAC AACGACCCTC AACCCCGGGA GAATCTGATG GCATCGCGGA TGAACAACCC GTCTCTGGTC GTACCCGACG CGCTGCCGCC CCTACTCGAA CTGGGTAA
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Protein sequence | MSSTWNEFEA RPVIGICART APVTVQGLDM TVSLALQAHV DMLATAGCTP LLVPLLPGAE DLVPRLDGLL LPGGPDLDPE LYGQPQHSRT WCGSTAADRV ELTLLRAALD AGRPVLAICR GMQVLNVLSG GTLHQHLPEV VDHDGHCPQT ATFTLGWNRL NLQPGSLAAA AYGTDVPTVA CHHHQGVDRV GAGLSVTARA SDGVIEAIEA TGHPFVLGVQ WEAGQDSDSR LHRALADAAG RTRQRPSTPG ESDGIADEQP VSGRTRRAAA PTRTG
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