Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2165 |
Symbol | |
ID | 5058628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2450735 |
End bp | 2451442 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640474428 |
Product | phosphoglycerate mutase |
Protein accession | YP_001158994 |
Protein GI | 145594697 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00557331 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCACCG TGGCGACCCT ACTGCTCCTG CGACATGGCC GGACGACCGC GAACGCGGCC GGAGGGCTGG CCGGTCGGCA GCCGGTCGAG CTGGACGAGA CCGGCCGTGA TCAGGCCGCC GCGGTCGGCG AACGGCTCCG GCTGCTGTCC TGCGCGACCG TGGTGACCAG CCCGTTGGTC CGTTGCCGGC AGACTCTGGA CCTGGCGCTG CCCGAGGCCG TGCCGGTGGT GGAGGAAGGG CTGACCGAGT GCGGGTACGG CAGCTGGGAG GGCCAGCCGC TGAAACAGCT CGCGAAGGAG CCGCTCTGGC CGGTCGTGCA GCAGCATCCC AGCGCGGCGG TCTTCCCGGG TGGGGAGGCG ATGGCGACCA TGGCGGCCCG GGCGGTGGCC GCGGTGCGTA CCTGGGATGC TCGGGTGAAC GAGGGACACG GGCCGGACGC GGTCTGGCTG GCCTGTACCC ATGGCGACGT GATCAAGGCG ATCGTGGCGG ACGCGCTCGG CTTGCACCTG GACCTCTTCC AGCGCATTGT CGTGGATCCG GCCTCGGTCA CGGTGATCCG CTACACCCCG CTGCGCCCGT TCCTGGTGCG GCTCAACGAC ACCGGCGGCG ATCTCACGGC GCTGGTCCCG CCCCCGCCGA AGCGAGGTCG GCGGAGCGCC GCCGATTCGG ATGCCGCGAT CGGTGGTGGC GCCGGGGCAG GGGCCTGA
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Protein sequence | MVTVATLLLL RHGRTTANAA GGLAGRQPVE LDETGRDQAA AVGERLRLLS CATVVTSPLV RCRQTLDLAL PEAVPVVEEG LTECGYGSWE GQPLKQLAKE PLWPVVQQHP SAAVFPGGEA MATMAARAVA AVRTWDARVN EGHGPDAVWL ACTHGDVIKA IVADALGLHL DLFQRIVVDP ASVTVIRYTP LRPFLVRLND TGGDLTALVP PPPKRGRRSA ADSDAAIGGG AGAGA
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