| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2142 |
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| Symbol | |
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| ID | 5058605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2425160 |
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| End bp | 2426014 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474405 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_001158971 |
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| Protein GI | 145594674 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.297323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.128757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGAC AGACCACCAC AAGTACGCCG TCACCGACCG ATCGGGGCCT GGAGGACCTC
GACGCGGCGG CCCTGGCGTA CGCGGCACGG ATCGAGGGGT TGCCGCCCCA GCGGCGTCAG
GAGGCCCGCG ACGACCTGGT CCGCTTCGCT CTGCCGTTCG CCGGACGACT GGCCCGTCGG
TATCGCGGGC GGGGCGAGCC GCTGGAGGAC CTGGAACAGG TCGCGCGGCT CGGGTTGGTG
AACGCGGTGG ATCGTTACGA CCCGGAGCGG GGCTCCTTCA CCGCGTATGC GGCGATCACC
ATCGTCGGTG AGATCAAGCG CCACTTCCGG GACCGTACCT GGGGGGTGCA CGTGCCCCGC
CGGCTGCGTG ATCTCATCCT CGAGGTTGGC CAGGCCACCG CGGCGTTGAC CAGCGAGTTG
TCTCGGGCGC CCACGGTGGC GGAGCTGGCG AGGCGGTTGG AGACGCCGGA GGAAGAGATC
CTCGCGGCGC TGGAGTCGGC TGCCGGCTAC AGCCCGGCCT CGCTCAACGC CCCGGTCGGC
GGCGAGAGCT CGGCCGAGTT CGGCGACCTG GTGGGTGAGT CCGACAACGC ACTGGAGTCG
GTGGACGATC GGGTAACCGT GAGTGGTCTG CTGCATCGGC TGCCCTGGCG GGAACGACGG
ATCCTCGCCA TGCGCTTCTA CGGCAACCAG ACCCAGGCGG AGATCGCCGC CCGCTTCGGC
ATCTCCCAGA TGCACGTGTC CCGGCTGTTG TCGCGGGCGC TGACCTGGCT GCGGCAGGCG
ATGCTCGCCG ACGCGCCGCC GCCGTGGCAG AACGGCGTCG CCGAGGCGGA GGCCGGCCGC
CGCGGAACTC GGTGA
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| Protein sequence | MFGQTTTSTP SPTDRGLEDL DAAALAYAAR IEGLPPQRRQ EARDDLVRFA LPFAGRLARR
YRGRGEPLED LEQVARLGLV NAVDRYDPER GSFTAYAAIT IVGEIKRHFR DRTWGVHVPR
RLRDLILEVG QATAALTSEL SRAPTVAELA RRLETPEEEI LAALESAAGY SPASLNAPVG
GESSAEFGDL VGESDNALES VDDRVTVSGL LHRLPWRERR ILAMRFYGNQ TQAEIAARFG
ISQMHVSRLL SRALTWLRQA MLADAPPPWQ NGVAEAEAGR RGTR
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