| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2124 |
|---|
| Symbol | |
|---|
| ID | 5058587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2402109 |
|---|
| End bp | 2403410 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640474387 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001158953 |
|---|
| Protein GI | 145594656 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0157882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAC CTCGTGTGGT GATCGTAGGG GCCGGTTTCG CCGGGTACCA CGCGGCAAAG
ACGCTCGGCC GGTTGGCCCG GGACCAGGCC GAGATCGTGC TGCTGAACAC GACCGACTAC
TTCCTGTATC TGCCGCTGCT GCCAGAGGTC GCCGCCGGTG TCGTCGAGCC GACCCGGCTT
TCGGTGCCGC TGGCGGGGAC ACTCGACGGC GTCCGTCTTG TGGTCGGCGA AGCCGACCAT
GTTGACCTGC GGAACCGCTG GGTCAGTTTC ACCCAGCCGG AAGGGGAACG GAACCGCATC
GCGTACGACC GGCTCGTACT CGCCGTCGGT AGCGTCAACA AGCTGCTGCC GATCCCCGGG
GTGACCGAGT ACGCCCACGG CTTTCGCGGC CTGCCGGAGG CGCTCTACCT ACATGACCAC
GTGGTCCGAC AGATTGAGCT GGCAGAACAA GCCACCGACC CGGCTGAGCA ACGGGCGCGG
GCCACCTTCG TGGTGGTGGG AGCCGGCTAC ACCGGCACCG AGGTGGCCGC CCACGGGCAG
CTGTTCACCG ACCGGCTCGT CGGGCAACGG TCTCGGCTGA AGCTCCGGCC CCGGTGGATG
CTGCTTGACG TGGCGCCGAG GGTGCTACCC GAGCTGGACC GGCGGATGTC CGACACCGCC
CATCGGGTCC TGGAAGAGCG TGGGATTGAT GTGCGGATGG GAACCTCGGT GGCGGTCGCG
ACCGCCGACG GGGTCAAGCT CACCGATGGG GAGTTCATCC CGACCTGCTC TCTCTTCTGG
TGTGTCGGGG TCCGTCCCGA TCCGCTCGTC GCGCAACTCG GCCTGCGGAC CGAGAAGGGC
CGCCTGGTGA CCGATGAGTA CCTCAACGTC CCAGGCTTTC CCGAGGTGTT CGCCTGCGGT
GACGCTGCGG CCGTTCCCGA CCTGACCCAG CCCGGGCAGG TCTGCGCGAT GACCGCGCAG
CACGCCCAGC GGCAGGGCAA ACTGGTTGCC CACAACATCG CCGCCTCGTA CGGGCAGGGC
ACCCGCAAGC CATACAAGCA CCATGAACTG GGCTGGGTGG TCGATCTGGG TGGTCTGGAC
GCGGCGGCTA ATCCACTCAA GGTGCCGCTG GCCGGGCTGC CCGCCAAGGT GGTCACCCGG
GGATACCACC TGCTCAACCT ACCCGGCAAT CGGGCCCGGG TGGGCGCCGA CTGGCTGCTG
GACGCGACGT TGCCCCGTCC GGCGGTCCAG CTGGGCCTGG TGCCGGCCAA CTCGGTTCCG
TTGGAGAGCA GCTCCCCCGA GGTACCCGCC CACATGGGGT GA
|
|---|
| Protein sequence | MTKPRVVIVG AGFAGYHAAK TLGRLARDQA EIVLLNTTDY FLYLPLLPEV AAGVVEPTRL
SVPLAGTLDG VRLVVGEADH VDLRNRWVSF TQPEGERNRI AYDRLVLAVG SVNKLLPIPG
VTEYAHGFRG LPEALYLHDH VVRQIELAEQ ATDPAEQRAR ATFVVVGAGY TGTEVAAHGQ
LFTDRLVGQR SRLKLRPRWM LLDVAPRVLP ELDRRMSDTA HRVLEERGID VRMGTSVAVA
TADGVKLTDG EFIPTCSLFW CVGVRPDPLV AQLGLRTEKG RLVTDEYLNV PGFPEVFACG
DAAAVPDLTQ PGQVCAMTAQ HAQRQGKLVA HNIAASYGQG TRKPYKHHEL GWVVDLGGLD
AAANPLKVPL AGLPAKVVTR GYHLLNLPGN RARVGADWLL DATLPRPAVQ LGLVPANSVP
LESSSPEVPA HMG
|
|---|
| |