| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2106 |
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| Symbol | |
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| ID | 5058569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2380040 |
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| End bp | 2381779 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474369 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001158935 |
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| Protein GI | 145594638 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.119399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0955445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCG CACCCGTAAG GCCAGATCCA ACTGCCGAAC CGTCCACTGA CGACGAGGCG
ACCGCCTTCG TCGACCTGGG CCTGCGCGAC GAACTCCTCG CCGCGCTCGC CGCGCTCGGC
TACGAGGAGC CGACGCCGAT CCAGCGGGAG GCGATCCCTC CCCTGCTCGC CGGACGGGAT
CTACTCGGCC AGGCCGCCAC GGGTACCGGC AAGACGGCCG CGTTCGCCCT GCCGATGCTG
CAACGGATGC CTGCCAACCG GTCGACCACC AATCCGGTGG CACTGGTGCT GGTACCCACC
CGAGAGCTGG CGGTACAGGT CTCGGAGGCG TTCCATCGGT ACGGCAAGGA ACTTGGCGCC
CGGGTACTGC CGATCTACGG TGGCCAGCCG ATCGGCCGGC AACTGCGCGC TCTGGACGCC
GGGGTGGACG TCGTGGTGGC AACCCCCGGT CGAGCGCTCG ACCACATCGC CCGCGGTACG
CTGCGCCTGG GTGACGTCGG CACCGTCGTG CTGGACGAGG CGGACGAAAT GCTGGACATG
GGCTTCGCCG AGGACATCGA GGCGATCCTG GAACACGCGC CGGAGCAGCG GCAGACCGTG
CTGTTCTCGG CGACCATGCC GGCCCGCATC GACGGCATGG CCCGGGCTCA CCTGACCGAC
CCGATCCGCA TCCTCATCGC GCGAGAGAAG CCGGTAGCCG GCGAGGCTCC CCGGGTACGG
CAGAGCGCGT ACCTGGTGTC CCGGGCGCAC AAGCCCGCCG CGCTGGGCCG GGTGCTGGAC
GTCGAGTCCC CCACGGCGGC GATCGTCTTC TGCCGCAGCC GGGAGGAGGT TGACCGGCTC
ACCGAGACGA TGAACGGTCG CGGCTACCGG GCCGAGGCGC TGCACGGCGG GATGAGTCAG
GAGCAGCGGG ACCGGGTGAT GGGTCGGCTG CGCGCCGGTA CCGCCGACCT GTTGGTAGCC
ACCGACGTGG CAGCGCGGGG CCTGGATGTC GAGCAGCTCA GCCACGTCGT CAACTACGAC
GTCCCCTCGG CGCCCGAGTC GTACGTGCAC CGGATCGGCC GGGTGGGGCG AGCCGGCCGG
GAGGGGGTGG CGATCACTCT CGCCGAGCCA CGGGCGCACC GGATGCTCAA GACCATCGAA
CGGGTCACCG GCCAACGGAT CACCATCGAC AAGATCCCCA CCGTGGCGGA CCTGCGCAAT
CGTCGCCTGG AACTCACCCA GGCCGCGCTG CGGGAGAGCC TGCTGGAGGA CGACCTGGAG
CCGTTCCGGG TCATCGTCGA GTCACTGAGC GACGAGTTCG ACCTGATGGA GGTGGCCCTC
GCCGCGGTAC GCCTGGCCCA CGAGGCCACC CTGCCCGGCG CCTTGGAGGA GGAAGAGGAG
ATCCCGGAGA TCGCGGTTCG CCCACCCCGG GCCGGCCGCC CGGGACACGA GGGCCGGGGA
GAGCGCCGGC CGGGGCGGCC CCGGAGCGCC GGCACCACCC AGGTCTTCGT CGGGCTGGGT
CGGCGTGCCG GGGTCCGACC GCAGGATCTG GTCGGCGCGA TCACCGGCGA GACCGGCATG
AACGGCCGGG ATATCGGCTC GATCGAGATC GCGGACCGCT TCTCGCTGGT GGAGGTGCCG
GCGGGGATGG CCGACGAGGT GATCTCCGGC CTGCGCGGCA GCACCATCAA GGGACGCCGG
ACGACCGTTC GCCGCGATCG TGACACCGAC GGGGGTGACC GCCGCCGGCA GCACCGTTGA
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| Protein sequence | MSSAPVRPDP TAEPSTDDEA TAFVDLGLRD ELLAALAALG YEEPTPIQRE AIPPLLAGRD
LLGQAATGTG KTAAFALPML QRMPANRSTT NPVALVLVPT RELAVQVSEA FHRYGKELGA
RVLPIYGGQP IGRQLRALDA GVDVVVATPG RALDHIARGT LRLGDVGTVV LDEADEMLDM
GFAEDIEAIL EHAPEQRQTV LFSATMPARI DGMARAHLTD PIRILIAREK PVAGEAPRVR
QSAYLVSRAH KPAALGRVLD VESPTAAIVF CRSREEVDRL TETMNGRGYR AEALHGGMSQ
EQRDRVMGRL RAGTADLLVA TDVAARGLDV EQLSHVVNYD VPSAPESYVH RIGRVGRAGR
EGVAITLAEP RAHRMLKTIE RVTGQRITID KIPTVADLRN RRLELTQAAL RESLLEDDLE
PFRVIVESLS DEFDLMEVAL AAVRLAHEAT LPGALEEEEE IPEIAVRPPR AGRPGHEGRG
ERRPGRPRSA GTTQVFVGLG RRAGVRPQDL VGAITGETGM NGRDIGSIEI ADRFSLVEVP
AGMADEVISG LRGSTIKGRR TTVRRDRDTD GGDRRRQHR
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