| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2099 |
|---|
| Symbol | |
|---|
| ID | 5058562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2372778 |
|---|
| End bp | 2374079 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640474362 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_001158928 |
|---|
| Protein GI | 145594631 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0645821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.344622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC GGGTCTTCCT CCTGCCGGAC CTCGGGGAGG GGCTGAGCGA GGCGGAGATC
GTCGAGTGGC GGGTCGCCGT GGGCGACACG GTAACGGTGG ACCAGGCCGT CGTGGAGGTG
GAGACGGCCA AGGCTGTCGT GGACGTGCCC TGCCCGTACG CCGGGCGGGT GGTGGCCCTG
CACGGCGCGG CGGGCGAGGT GCGGCCGGTC GGCCAGCCTT TGATCACCGT CGCGTCGTTG
GACGCGGTCG AGGCGGATAG CGCCCCCGGT GGGGCTGGCG GGCCCGCGGT CAACCGTGAG
CAGGAGCGAG CTGGCTCCGG GAACGTCTTG ATCGGGTACG GCACCGGCCA CGGCGGCGCG
GCTCGTCGGC GCCGGCCCCG GGTTGCCGGG GCCGTACCGG CCAGTGCCGC CCCGAGTGGC
GGCCTTGGTT CGGTCGGCGA GAGCCTTCGG GTCATCTCGC CGATCGTGCG GCGGCTGGCG
AAGCAGCGCG GCGTCGACCT TGCCACCCTG CGCGGCACCG GTCGTGGCGG GGTGATTCGC
CGGGCTGATG TGGAGGCTGC CACCCCGGCG TCGGTCGCCG TGCCCGACAC GCACGCCGTG
CCCGCCGACG GCGAGGTGAT CGTGCCGCTG ACCGGCATCC GCAAGGTAAT CGCCGACAAG
CTTTCCCGCA GCCGGCGGGA GATTCCCGAG GTGACGATCT GGGTGGATGC CGACGCGACC
GCCCTGCTGG AGACCCGGGC GGCCATCAAC GCGGCCACCC CGGCCGAACC GGTGAGCATC
CTGGCGCTGC TCGCCCGGAT CTGCCTCTCC GGTCTACGGA GGTTCCCCCA GCTCAACGCC
CGGGTAGATA GCGAGGCGCA GCGGATCATC CAGTCCGCCG GGGTACACCT GGGGATCGCC
GCCCAGACCG ACCGAGGGCT CGTGGTCCCG GTCTTGCGCG ACGCACAGCG GCTCACCACC
GCCGGGCTGG CCGCCGCGTT GGCCGAGACC ACGGAGGCGG CGCGGGCAGG AACGCTGTCG
CCGGCCCGGC TCGCCGGCGG GACGTTCACG CTGAACAACT ACGGCGTGTT CGGGGTGGAC
GGGTCCACGC CGATCATCAA CCATCCGGAG GCGGCGCTGC TCGGCGTCGG GCGGATCGTG
GACAAGCCGT GGGTGGTTGA CGGGCAGCTT GCGGTCCGCA AGGTGACACA GCTCAGCCTC
ACCTTTGATC ATCGGGTCTG CGACGGCGGG GTGGCCGGTG GCTTCCTGCG GCACGTCGCG
GACTGCGTCG AGCGGCCAGC GGTGTTGATC GCGAACCTCT GA
|
|---|
| Protein sequence | MSERVFLLPD LGEGLSEAEI VEWRVAVGDT VTVDQAVVEV ETAKAVVDVP CPYAGRVVAL
HGAAGEVRPV GQPLITVASL DAVEADSAPG GAGGPAVNRE QERAGSGNVL IGYGTGHGGA
ARRRRPRVAG AVPASAAPSG GLGSVGESLR VISPIVRRLA KQRGVDLATL RGTGRGGVIR
RADVEAATPA SVAVPDTHAV PADGEVIVPL TGIRKVIADK LSRSRREIPE VTIWVDADAT
ALLETRAAIN AATPAEPVSI LALLARICLS GLRRFPQLNA RVDSEAQRII QSAGVHLGIA
AQTDRGLVVP VLRDAQRLTT AGLAAALAET TEAARAGTLS PARLAGGTFT LNNYGVFGVD
GSTPIINHPE AALLGVGRIV DKPWVVDGQL AVRKVTQLSL TFDHRVCDGG VAGGFLRHVA
DCVERPAVLI ANL
|
|---|
| |