| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2098 |
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| Symbol | |
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| ID | 5058561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2371774 |
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| End bp | 2372778 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474361 |
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| Product | transketolase, central region |
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| Protein accession | YP_001158927 |
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| Protein GI | 145594630 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0340316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.234627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA TGACCATGGC TAAGGCGCTC AACACCGCGC TCGCCGACGC GATGCTCGAC
GACGACCGGG TGGTCGTCTT CGGTGAGGAC GTCGGCCAAC TCGGCGGGGT CTTCCGGATC
ACCGACGGGC TGGCGGCCCG CTTCGGCGAC AAGCGCTGCT TCGACACACC GCTCGCCGAG
GCTGGCATCG TCGGTTTCGC GGTTGGCCTC GCCATGTCCG GGCTGCGGCC GGTGGTGGAG
ATGCAGTTCG ACGCGTTTGG GTACCCGGCC TTCGAGCAGA TCGCCTCGCA CGTGGCGAAG
CTGCGCAACC GCACCCGTGG CGCGCTGAGC GCGCCCATCG TCATCCGGAT CCCGTACGCG
GGCGGCATCG GCGGGGTGGA GCACCACTGC GACTCCTCCG AGGCGTACTA CGCGCACACC
CCCGGTCTGA AGGTCGTCAC CCCGGCCACC GTGACCGATG CCTACTCGCT GCTGCGTGCG
GCGATCGACG ATCCGGACCC GGTCGTTTTC CTGGAGCCGA AGAAGCTCTA CTTCGCCAGC
GCCGAGACGC AGTTGCCAGC TCGGACCGAG CCGTTCGGCC GCGCCGTCGT ACGCCGTCGG
GGCACTGATG CCACCCTGGT CGCGTACGGG CCGGCGGTGC CGGTGGCCCT GGCAGCCGCC
GAGGCGGCCC AGGAGGAGGG CTGGAACCTC GAAGTCGTTG ACGTGCGGAC GATCGTACCG
TTCGACGACG GCACGATCGC GGCGTCGGTG CGAAAGACGG GCCGGTGCGT GGTGGTCCAG
GAGGCCCAGG GCTTCGCCGG AGTCGGCGCG GAGATCGCCG CGCGGGTGCA GGAGCGTTGC
TTCCACTCCC TACACGCGCC GGTGCTGCGG GTTGCCGGGC TGGACATCCC CTATCCGGCG
CCGATGCTGG AGCACACCCA CCTGCCGTCG GTGGATCGGG TGCTCGACGC GGTGGCCCGC
CTCCAGTGGG ACGACCAGCC CGACGAGCGA TGGGTGGCGG CCTGA
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| Protein sequence | MASMTMAKAL NTALADAMLD DDRVVVFGED VGQLGGVFRI TDGLAARFGD KRCFDTPLAE
AGIVGFAVGL AMSGLRPVVE MQFDAFGYPA FEQIASHVAK LRNRTRGALS APIVIRIPYA
GGIGGVEHHC DSSEAYYAHT PGLKVVTPAT VTDAYSLLRA AIDDPDPVVF LEPKKLYFAS
AETQLPARTE PFGRAVVRRR GTDATLVAYG PAVPVALAAA EAAQEEGWNL EVVDVRTIVP
FDDGTIAASV RKTGRCVVVQ EAQGFAGVGA EIAARVQERC FHSLHAPVLR VAGLDIPYPA
PMLEHTHLPS VDRVLDAVAR LQWDDQPDER WVAA
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