| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2097 |
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| Symbol | |
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| ID | 5058560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2370626 |
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| End bp | 2371774 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474360 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_001158926 |
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| Protein GI | 145594629 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0461573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCA CACCCCGGGC GGTCCGCAGA AGGCCCCGGC CGGCCGCACC ACCGGATCCG
GCCCGCCCGT TGCTGCCCAC CAGCGAGCAG ATTCGCCTGC TCGACCCCGC CGGCACCCCA
CTGCCGGCGC ACCCCGACTA CCCGGCGCCC CCGGTCGAGG TGCTCGTCGA GCTGTACCGC
CGGATGGTGC TCGGCCGCCG CTTTGACCTG CAGGCCACCG CCCTGACCAA ACAGGGCCGA
CTCGCCGTCT ACCCGTCGGC TCGGGGCCAG GAGGCGTGCC AGGTCGGCGC GATCCTCGCG
CTACGCGACG ACGACTGGGT GTTCCCGACC TATCGCGAGT CAATGGCGTT GACCGCCCGA
GGGATCGACC CCGTCGAGGT GCTGACCCTG CTCCGCGGGG ACTGGCACTG TGGTTACGAT
CCGGCCGTGC GGCGCACCGC CCCGCAGTGC ACCCCGTTGG CCACCCAGTG TGTGCACGCC
GCCGGCCTCG CCTACGGCGA GGCGTACCAG GGCCGGGACA CGGTGGCATT GGCCTTCATC
GGCGACGGTG CCACCAGTGA GGGTGACTTC CACGAGGGGG TCAACTTCGC CGCCGTCTTC
AAGGCGCCGG TCGTCTACTT CGTCCAGAAC AACCAGTACG CGATCAGCGT GCCGCTGTCC
CGGCAGACCG CCGCACCCAG TCTCGCGTAC AAGGGCGTCG GTTACGGCGT GCCCAGCGAG
CAGGTCGACG GCAACGATCC GGTCGCCGTC CTCGCGGTGC TCAACCGGGC CGTGGCGCAC
GCCCGTGCCG GCCACGGCCC CTTTCTGGTG GAGGCGCACA CCTACCGGAT GGAGCCGCAC
ACCAACGCCG ACGACGCCGC CCGTTACCGG GACGCCGATG AGGTGGCGAG CTGGCAGGAC
CGCGACCCGG TTGTTCGGTT GGAGACCCAC CTGCGGGACC GGGGGGCGTT GGACGACAGC
ACGGTGGCGC GGGTGGCCGC GCAGGCCGAG GAGTACGCGG CCGACCTGCG CGAGCGGATG
CACGACAAGC CAACCGTTGA CCCGTTGACG CTCTTCGACC ACGTCTACGC CGAGCCGACG
CCGCAGCTGG TCGAACAGCG CGAACAGGTC CGTGCCGAGC TGACCGCCGA CCAGGAGGGA
GCCGGGTGA
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| Protein sequence | MTTTPRAVRR RPRPAAPPDP ARPLLPTSEQ IRLLDPAGTP LPAHPDYPAP PVEVLVELYR
RMVLGRRFDL QATALTKQGR LAVYPSARGQ EACQVGAILA LRDDDWVFPT YRESMALTAR
GIDPVEVLTL LRGDWHCGYD PAVRRTAPQC TPLATQCVHA AGLAYGEAYQ GRDTVALAFI
GDGATSEGDF HEGVNFAAVF KAPVVYFVQN NQYAISVPLS RQTAAPSLAY KGVGYGVPSE
QVDGNDPVAV LAVLNRAVAH ARAGHGPFLV EAHTYRMEPH TNADDAARYR DADEVASWQD
RDPVVRLETH LRDRGALDDS TVARVAAQAE EYAADLRERM HDKPTVDPLT LFDHVYAEPT
PQLVEQREQV RAELTADQEG AG
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