Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2092 |
Symbol | |
ID | 5058555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2365537 |
End bp | 2366337 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474355 |
Product | hypothetical protein |
Protein accession | YP_001158921 |
Protein GI | 145594624 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.613654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0908171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCGAA CCGAGCACGC TCTTCTCGTC ACCAGTATCA GCGCCAACCA GGCCGAGCCT CCTCAGGACG GTCTGGTCGG GCACGTCATC GAGCTGGTGG AGCGGCTGGG CGGTCCCGGC GCTGGCCTCG CCGTGGCGCT GGAGAACCTG TTCCCACCGA TTCCCAGCGA GGTGATCCTC CCGCTGGCGG GGTTCGTTGC CGGCCAGGGG CGGATGAGTG TCGTCAGTGC GATCTTCTGG ACCACCCTGG GCTCGCTGTT GGGTGCGCTC GCGCTGTACT ACATCGGTGC GGTGTTCGGC CGGGAACGGA TGCGAGCCAT CGCCGCCCGG CTTCCGCTGG TGAAGCTGAG TGACGTCGAC AAGACCGAAG AGTGGTTTCT GCGGCACGGA GTCAAGGCGG TGTTCTTCGG CCGGATGATT CCGATCTTCC GAAGCATGAT CTCGATTCCG GCCGGTGTGG AGCGGATGCC GGTGTGGACC TTCGTCGTCT ACACCACCTT GGGCAGTCTG ATCTGGAACA CCACCTTCGT CATGGCCGGG TACCTGCTCG GCGACAACTG GCACCTGGTC GAGGGGTACA CCGGCGTCCT CCAGAACGTC GTCATCCTGG CCTGCGTGGC TGGGCTCGTC TGGTTCGTCG TCACCCGGCT CCGCCGGTCC CGGACGACCG GGGGAGTGCT GCCCAACGGG CCGGAGGACG AGTTTTCCGC GCCGCTGCCG CCCGTCGATG GTGTCCCCGA CCCGCAGGGC CGGGGGACCC TCTACCGGAG TAGCTGGTCC AAAGACACCA CCGTGGGCTG A
|
Protein sequence | MPRTEHALLV TSISANQAEP PQDGLVGHVI ELVERLGGPG AGLAVALENL FPPIPSEVIL PLAGFVAGQG RMSVVSAIFW TTLGSLLGAL ALYYIGAVFG RERMRAIAAR LPLVKLSDVD KTEEWFLRHG VKAVFFGRMI PIFRSMISIP AGVERMPVWT FVVYTTLGSL IWNTTFVMAG YLLGDNWHLV EGYTGVLQNV VILACVAGLV WFVVTRLRRS RTTGGVLPNG PEDEFSAPLP PVDGVPDPQG RGTLYRSSWS KDTTVG
|
| |