Gene Strop_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2092 
Symbol 
ID5058555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2365537 
End bp2366337 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID640474355 
Producthypothetical protein 
Protein accessionYP_001158921 
Protein GI145594624 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.613654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0908171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGAA CCGAGCACGC TCTTCTCGTC ACCAGTATCA GCGCCAACCA GGCCGAGCCT 
CCTCAGGACG GTCTGGTCGG GCACGTCATC GAGCTGGTGG AGCGGCTGGG CGGTCCCGGC
GCTGGCCTCG CCGTGGCGCT GGAGAACCTG TTCCCACCGA TTCCCAGCGA GGTGATCCTC
CCGCTGGCGG GGTTCGTTGC CGGCCAGGGG CGGATGAGTG TCGTCAGTGC GATCTTCTGG
ACCACCCTGG GCTCGCTGTT GGGTGCGCTC GCGCTGTACT ACATCGGTGC GGTGTTCGGC
CGGGAACGGA TGCGAGCCAT CGCCGCCCGG CTTCCGCTGG TGAAGCTGAG TGACGTCGAC
AAGACCGAAG AGTGGTTTCT GCGGCACGGA GTCAAGGCGG TGTTCTTCGG CCGGATGATT
CCGATCTTCC GAAGCATGAT CTCGATTCCG GCCGGTGTGG AGCGGATGCC GGTGTGGACC
TTCGTCGTCT ACACCACCTT GGGCAGTCTG ATCTGGAACA CCACCTTCGT CATGGCCGGG
TACCTGCTCG GCGACAACTG GCACCTGGTC GAGGGGTACA CCGGCGTCCT CCAGAACGTC
GTCATCCTGG CCTGCGTGGC TGGGCTCGTC TGGTTCGTCG TCACCCGGCT CCGCCGGTCC
CGGACGACCG GGGGAGTGCT GCCCAACGGG CCGGAGGACG AGTTTTCCGC GCCGCTGCCG
CCCGTCGATG GTGTCCCCGA CCCGCAGGGC CGGGGGACCC TCTACCGGAG TAGCTGGTCC
AAAGACACCA CCGTGGGCTG A
 
Protein sequence
MPRTEHALLV TSISANQAEP PQDGLVGHVI ELVERLGGPG AGLAVALENL FPPIPSEVIL 
PLAGFVAGQG RMSVVSAIFW TTLGSLLGAL ALYYIGAVFG RERMRAIAAR LPLVKLSDVD
KTEEWFLRHG VKAVFFGRMI PIFRSMISIP AGVERMPVWT FVVYTTLGSL IWNTTFVMAG
YLLGDNWHLV EGYTGVLQNV VILACVAGLV WFVVTRLRRS RTTGGVLPNG PEDEFSAPLP
PVDGVPDPQG RGTLYRSSWS KDTTVG