| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2009 |
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| Symbol | |
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| ID | 5058472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2279576 |
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| End bp | 2280316 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474275 |
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| Product | UbiC transcription regulator-associated domain-containing protein |
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| Protein accession | YP_001158841 |
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| Protein GI | 145594544 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.378179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0458399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGTCG ACGCGGTTCG TGGTGGGGTG CCCGAGCATG GTCGGGTTCC CAAGTATTTC
GTGGTCAAGA ACCAACTACT CAACCTGCTG GCCGAACTGG GAGAGGGTGC CCTGCTGCCG
GCCGAGCGTC AGCTCGCGGT GGCGTACGGG GTTGCTCGCT CCACGTTGCG GCAGGCGATC
TCCGAGCTGA CCATGGAGGG ACGCCTGCGC GCGTACCGTG GACGCGGCAC GTTCGTCGCC
GCTCCCAAGC TGATCCAGCC GCTTGGCCTG CACAGCTACA CCGAAGCGCT GCACGCCATG
GGTCATCAGC CGAGCCGTCG TGTGGTCACG GTCGACTGTC AGCCCGCCGG CAGCTCGCTC
GCGGCGGATC TGGGGGTCGA TGCCACCGAC GAGGTGGTGC ACCTGGAGCG GGTGCTGCTC
GCCGACGACG AACCGCTGGG GCTGGAGAGC ACCTACCTGC CGGTGCGCCG GTTCGCCGAC
CTGATGACCG ACTTCGACGG CACCGGCTCG CTCTACCAGC ACATGACCGA CCGGTACGGC
ATCCGCTATG CCGAGGCCAC CGAGCGCATC GAGACCGTGC TGGCCAACCC TCGCGAGGCG
ATGCTGCTCG GCACGAACCC CGCCCAGCCG ATGTTGCTCA TGCAACGGGT CTCGGCGGAC
CAGGACGGTG TGCCGATCGA GCGGGTCCGC TCCCTGTATC GCGGTGACCG GATCGGTTTC
GCCACCCGAC TGATCGGCTG A
|
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| Protein sequence | MTVDAVRGGV PEHGRVPKYF VVKNQLLNLL AELGEGALLP AERQLAVAYG VARSTLRQAI
SELTMEGRLR AYRGRGTFVA APKLIQPLGL HSYTEALHAM GHQPSRRVVT VDCQPAGSSL
AADLGVDATD EVVHLERVLL ADDEPLGLES TYLPVRRFAD LMTDFDGTGS LYQHMTDRYG
IRYAEATERI ETVLANPREA MLLGTNPAQP MLLMQRVSAD QDGVPIERVR SLYRGDRIGF
ATRLIG
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