| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2001 |
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| Symbol | |
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| ID | 5058464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2271513 |
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| End bp | 2273282 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640474267 |
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| Product | Alpha-amylase |
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| Protein accession | YP_001158833 |
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| Protein GI | 145594536 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.357099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.053891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACCA CGCTCGGTCC ACACCGCTGG CGTCGGCGTG CAGCCGGCCT CCTCGCCGCC
GCTCTCGTCA CCGCCATCAC CGCCATCACC GCCACCTCGC TGCCGGCCAA CGTTCAGGCG
TCGCCGCCGG GCGACCGGGA CGTCACCGCC GTCCTGTTCG AGTGGCGCTT CGACTCGATT
GCCCGCGCCT GCCAGGACAC ACTGGGGCCC AAGGGATACG GCTTCGTGCA GGTCTCCCCA
CCGCAGGAGC ACATCCAGGG CTGGCAGTGG TGGACGTCGT ACCAACCCGT CAGCTACGAC
ATCTCCAGCC GGCTGGGTGA CCGGAACGCG TTCCGGGCCA TGACCGAGGC CTGCCACGGC
GCCGGAGTGA AGGTCATCGT GGACGCGGTC ATCAACCACA TGACCGCAGG ATCCGGCACC
GGCACCGGCG GCACTAACTA CAACAAGTAC GACTACCCAG GCTTCTACCA GGTCCAGGAC
TTCCACTCCT GCCGCAAACA CATCAGCGAC TACCGCAACC GCTACGACGT CCAGGAGTGT
GAACTGCTCG GCCTGGCCGA CCTGAACACC GGGTCCGACT ACGTACGGGG GCGTATCGCT
GGCTACCTCA ACGACCTTCT CTCCCTCGGC GCGGACGGCT TCCGCATCGA CGCGGCCAAG
CACATCGCCG CCAGCGACCT GGCGGCGATC CGCTCCCGGA TGAGCAACCC CAACGCCTAC
TGGATCCAGG AAGTGATCTA CGGTGCCGGT GAGGCGGTCC AGCCCAGCGA GTACCTTGGC
ACGGGCGACG TGCAGGAGTT CCGCTACGCG CGGGACCTGA AGCGGGTGTT CCAGAACGAG
AAGCTGGCCT ATCTGCGCAA CTACGGCGAA GGTTGGGGCT ACCTGTCCAG CGGCAAGGCC
GGCGTCTTCG TCAACAACCA CGACACCGAA CGCAACGGCG AGACCCTCTC CTACAAGAAC
GGCTCCGACT ACACGCTCGC CAACGTGTTC ATGCTCGCCT GGCCGTACGG CACGCCGCAC
GTGCACTCCG GCTACGAGTT CAGCGACCGG GACGCCGGCC CACCCAACGG CGGCCACGTC
AACGCCTGCT ACTCCGACGG GTGGACGTGT CAACACGCCT GGCGCCAAAT AGCCAACATG
GTGGGCTTCC GCAACGCCGC CGCCGGGACC GGTGTGACGA ACTGGTGGGA CAACGGCAAC
GACCAGATCG CGTTCGGCCG CGGTGACCGT GCCTTCGTCG CCATCAACCA GGAAGGCGGC
ACCCTCACCC GAACCTTCCA GACGTCACTG CCCGCCGGCA CCTACTGCGA CGTGCAGCAC
GGCGACCCGA CCACGAGCGG TGGATGCACC GGCCCCACCT ACACGGTCAA CTCCTCGGGC
CAGTTCGCCG CGAGCATCGG CCCGGGTGAC GCGGTCGCCC TCTACCGCGG CGCCGCGGGC
AGCCCGACTC CGGACCCGTC CCAGTCCCCG TCGGATCGCG TCAACGTCAC GTTCGCGGTC
ACCGCCACCA CCGTCTGGGG GCAGAACATC TTCGTCGTCG GTGACCACCC TGACCTCGGC
TCATGGAACC CCGACCGCGC CCTGCCGATG AGCGCCGCCA GCTACCCCCA GTGGCGGCTG
ACCACTCCCC TGCCCAGCGG CAGCGCCATC CAGTACAAGT ACATCCGCAA GGAGTCCAAC
GGTCACGTTA CCTGGGAAAG CGGCAACAAC CGGACCGCCA CGATCCCGAA CAGCGGAACA
CTGACCCTGA CCGACAATTG GCGAAACTGA
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| Protein sequence | MLTTLGPHRW RRRAAGLLAA ALVTAITAIT ATSLPANVQA SPPGDRDVTA VLFEWRFDSI
ARACQDTLGP KGYGFVQVSP PQEHIQGWQW WTSYQPVSYD ISSRLGDRNA FRAMTEACHG
AGVKVIVDAV INHMTAGSGT GTGGTNYNKY DYPGFYQVQD FHSCRKHISD YRNRYDVQEC
ELLGLADLNT GSDYVRGRIA GYLNDLLSLG ADGFRIDAAK HIAASDLAAI RSRMSNPNAY
WIQEVIYGAG EAVQPSEYLG TGDVQEFRYA RDLKRVFQNE KLAYLRNYGE GWGYLSSGKA
GVFVNNHDTE RNGETLSYKN GSDYTLANVF MLAWPYGTPH VHSGYEFSDR DAGPPNGGHV
NACYSDGWTC QHAWRQIANM VGFRNAAAGT GVTNWWDNGN DQIAFGRGDR AFVAINQEGG
TLTRTFQTSL PAGTYCDVQH GDPTTSGGCT GPTYTVNSSG QFAASIGPGD AVALYRGAAG
SPTPDPSQSP SDRVNVTFAV TATTVWGQNI FVVGDHPDLG SWNPDRALPM SAASYPQWRL
TTPLPSGSAI QYKYIRKESN GHVTWESGNN RTATIPNSGT LTLTDNWRN
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