| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1979 |
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| Symbol | |
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| ID | 5058442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2245214 |
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| End bp | 2246878 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640474246 |
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| Product | regulator of chromosome condensation, RCC1 |
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| Protein accession | YP_001158812 |
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| Protein GI | 145594515 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
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| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.158856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.33934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGG GACTCTGCCC GTGGGTAGTC CGTGGCGCTG GAGCATGCGG GGTGGTGCGC
GTCCTCGCTG GGTGGCTCTT TCTCGCGTTG GCGGTGACGG TCACGCAGGC ACTCGGCACA
TGGCCCGCGA TCGCGCAGTC CGGGCTGTCG TCGTCTGTCG TCGTGTCGGA CACCGTCCTC
GCCTGGGGCG ACAACTTCTC CGGCCAGTTG GGCGACGGGA CCACCACCGC CCGCAGCACA
CCTGTGACGG TCGGCCTACC CGCAGGCACC ACGATCACCG CCCTCGCCGC CGGCGGCTCC
CATAGTCTGG CGCTCACCGA CACTGGCGTC GTCCTCGCCT GGGGTAGCAA CTCGCGTGGC
CAGTTGGGCG ACGGGACCAC CACCGACCGC AGCACACCTG TGACGGTCGG CCTACCCGCA
GGCACCACGA TCACCGCCCT CGCCGCCGGC CGCCGCCATA GTCTGGCGCT CACCGACACT
GGCGCCGTCC TCGCCTGGGG TAGCAACTCG AATGGCCAGT TAGGCGACGG GACCACCACC
GCCCGCAGCA CACCTGTGAC GGTCGGCCTA CCCGCAGGCA CCACGATCAC CGCCCTCGCC
GCCAGCACCT ACAGTCTGGC GCTCACCGAC ACTGGCGCCG CCCTCGCCTG GGGTAGCAAC
TCGCGTGGCC AGTTGGGCGA CGGGACCACC ACCGACCGCA GCACACCTGT GACGGTCAGC
CTACCCGCAG GCACCACAAT CACCGCCCTC GCCGCCAGCT ACGACCACAG TCTGGCGCTC
ACCGACACTG GCGCCGTCCT CGCCTGGGGT AGCAACTCGA ATGGCCAGTT AGGCGACGGG
ACCACCACCA ACCGCAGCAC ACCTGTGACG GTCGGCCTAC CCGCAGGCAC CACGATCACC
GCCCTCGCCG CCGGCCGCTC CCATACTTTG GTGCTCACCT CCGCTGGCGC CGTCCTCGCC
TGGGGTAGCA ACTCGAATGG CCAGTTAGGC GACGGGACCA CCACCGACCG CAGCACACCT
GTGACGGTCG GCCTACCCGC AGGCACCACG ATCACCGCCC TCGCCGCCGG CTACTACCAC
AGCCTGGCGC TCACCGACAC TGGCGCCGTC CTCGCCTGGG GTGGCAACTC GTATGGCCAG
TTGGGCGACG GGACCACCAC CGACCGCAGC ACACCTGTGA CGGTCGGCCT ACCCGCAGGC
ACCACGATCA CCGTACTCGT CAGCATGGAC AACCACGGCA TGGCCCTGGT CGCACCACCA
ACGTCCACCA CCACATTGCA GGTCACACCG GCAAACCCGG CAGCGGATCA GGATGTCACC
CTCACCGCCA CGGTCACCTG CACCACCGAC ACCCCCACCG GAACCATCAC CTTCCGCACC
GGCACCACCA CCCTCGCCGT CGTACCCCTC ACCACCAACG CCACCCACAC CACCACACTG
CCCGCAGGCA CCCACACCCT CACCGCCAAC TACACCAGCA CCAACACCTG CCCCAACAGC
CAATCCCCAC CCATCAGCAT CACCATCGCC CCACCACCCG ACGAGCCCGA CCTGCCCATC
ACCGGCCCCA ACCTGCCCAC GACCATCGGC GCCGCCACCC TGCTCACCCT CACCGGCGCC
ACCCTCATCC ACCTCACTCA CCGACGCCGA CCAACCAACC CGTGA
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| Protein sequence | MMQGLCPWVV RGAGACGVVR VLAGWLFLAL AVTVTQALGT WPAIAQSGLS SSVVVSDTVL
AWGDNFSGQL GDGTTTARST PVTVGLPAGT TITALAAGGS HSLALTDTGV VLAWGSNSRG
QLGDGTTTDR STPVTVGLPA GTTITALAAG RRHSLALTDT GAVLAWGSNS NGQLGDGTTT
ARSTPVTVGL PAGTTITALA ASTYSLALTD TGAALAWGSN SRGQLGDGTT TDRSTPVTVS
LPAGTTITAL AASYDHSLAL TDTGAVLAWG SNSNGQLGDG TTTNRSTPVT VGLPAGTTIT
ALAAGRSHTL VLTSAGAVLA WGSNSNGQLG DGTTTDRSTP VTVGLPAGTT ITALAAGYYH
SLALTDTGAV LAWGGNSYGQ LGDGTTTDRS TPVTVGLPAG TTITVLVSMD NHGMALVAPP
TSTTTLQVTP ANPAADQDVT LTATVTCTTD TPTGTITFRT GTTTLAVVPL TTNATHTTTL
PAGTHTLTAN YTSTNTCPNS QSPPISITIA PPPDEPDLPI TGPNLPTTIG AATLLTLTGA
TLIHLTHRRR PTNP
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