Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1961 |
Symbol | |
ID | 5058424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2228410 |
End bp | 2229615 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640474232 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001158798 |
Protein GI | 145594501 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0209751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC CGGCCGTTCA CCATCGCATC CTCATCGTCG GCGGCGGCAG CGCCGGCATC GATGTCGCCG CCCGGCTCCG CCGGGCGAGA GTCCCCGACA TCGGCCTCAT CGATCCCGCA GAAACCCACT ACTACCAGCC GCTGTGGACC TTGGTCGGTG GCGGATGCGC CAAGGCTAAG GAGAGCGCCC GCCCGCAGGC GTCGGTCATG CCGAAGGGCA TCGCCTGGAT CAAGGACGCC GCGCACACCA TCGACCCGGA CCAGCAGACG GTCACCACCG CCGGTGGGAT CCGGGTCCGC TACGACCATC TCGTCGTGTG CCCCGGCATC CAACTCGACT GGGACAAGAT CCCCGGCATG GCGGCAGCCA TGGACACTCC GATGGTATCC AGCAACTACA CGTACGCCAC GGCGCCGAAG ACGTGGGAAC TGATCCGAAA CCTGCGCTCC GGGACCGCGG TGTTTACCAT GCCCGTCGGG CCGATCAAGT GTGCCGGCGC CCCACAGAAG ATCGCTTACC TGGCCGCGGA CCACTGGCGT CGACAAGGCG TTCTTAAGGA TATCCGGGTC GTGCTCGTGC TGCCCACCCC AACCATGTTC GGCGTCCAGG TCTTCGCCGA TGAGCTCGAA CGCGTCGCCG TCCGGTACGG CATCGAGGTC CACAAAAACA GCGAGCTCGT CGAAGTCGAC GCCGACAGTC GCCAGGCGGT GATCGCCGAT CACAACAACC GCAGTGGACA AACCATCGGC TACGACATCA TGCATGTTGT ACCACCGCAG TCAGCCCCCG ACTGGCTCAA GCAGACCACC CTGGCAGACC CCGAAAGCCC GGCTGGCTAC GTCCACGTCG ACCGGAACAC CCTGCAGCAC ACCCGATATC CGAACGTGTT CGCCCTCGGC GATGCCGGGT CCACTCCGAA TTCCAAGACC GGTGCCGCGG TCCGCAAACA GGCACCGGTG GTGGCCCGCA ATCTCATCGC CACGATCAGG GGCGAGCCGC TGCCGGCGGC ATATGACGGG TACGCATCCT GCCCACTGAC CACGGCCCGC AACAAGATGC TGCTCGCCGA GTTCGACTAC ACCATGCATC CCGCACCCAG CATTCCCTTC CTCGACACCA CCCACGAACG CACCGACATG TGGTATCTCA AGCGCTACGG ACTGCCGGCC CTCTACTGGA ATCTCATGCT TCGCGGCCGT GCCTGA
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Protein sequence | MTAPAVHHRI LIVGGGSAGI DVAARLRRAR VPDIGLIDPA ETHYYQPLWT LVGGGCAKAK ESARPQASVM PKGIAWIKDA AHTIDPDQQT VTTAGGIRVR YDHLVVCPGI QLDWDKIPGM AAAMDTPMVS SNYTYATAPK TWELIRNLRS GTAVFTMPVG PIKCAGAPQK IAYLAADHWR RQGVLKDIRV VLVLPTPTMF GVQVFADELE RVAVRYGIEV HKNSELVEVD ADSRQAVIAD HNNRSGQTIG YDIMHVVPPQ SAPDWLKQTT LADPESPAGY VHVDRNTLQH TRYPNVFALG DAGSTPNSKT GAAVRKQAPV VARNLIATIR GEPLPAAYDG YASCPLTTAR NKMLLAEFDY TMHPAPSIPF LDTTHERTDM WYLKRYGLPA LYWNLMLRGR A
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