Gene Strop_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1957 
Symbol 
ID5058420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2224346 
End bp2224726 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content61% 
IMG OID640474228 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001158794 
Protein GI145594497 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.343922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.215652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCC ACGTCTCACA GGTGGGCGTG TATGTGAACG ACCAGGACGC AGCACTCGCG 
TTCTACACGG AGAAGCTGGG CTTCGAGGTG CGGTCGCTCC GCGAGGGCCC GGGTATGAAG
TGGATCGAGG TGGCGCCGCC CAGCGGGCAG ACCACCATCA GTCTGGCCTC GAAGGACTTC
CCGGTCGGCG ACGAGGCCAA GATCGGTGTC TACACCGACA TCGCGTTCGA GACGCAGGAC
ATCCACGGGC TGTACGAGAC ATACCGCCAG CGCGGCGTGA AGTTCACCAA CGAACCGGAG
CTCCAGCCCT ATGGTAAGTG GTTTGCCGCC TTTCTGGACC AGGACGGCAA TCAATTCTTC
GTCTTTCAGC CCGTCGAGTA G
 
Protein sequence
MISHVSQVGV YVNDQDAALA FYTEKLGFEV RSLREGPGMK WIEVAPPSGQ TTISLASKDF 
PVGDEAKIGV YTDIAFETQD IHGLYETYRQ RGVKFTNEPE LQPYGKWFAA FLDQDGNQFF
VFQPVE