Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1932 |
Symbol | |
ID | 5058395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2207198 |
End bp | 2208061 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474206 |
Product | integrase catalytic subunit |
Protein accession | YP_001158772 |
Protein GI | 145594475 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00436726 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0854041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC TGGCCGCCGA CGGGATCCCC GTCGCGGTGA CGTGCCGGGT ATTGAACATC GCTCGTCAGC CCTACTACCG GTGGCTCGGC CGGCCCGTCG GTGACGCCGA ACTCGTCGCC GCTCATCGCG CGAACGCCTT GGTCGATGCC CACCGCGATG ACCCGGAGTT CGGGTACCGG TTCCTGGTCG ATGAGGCCCG CGCCGCCGGC CAGGCGATGG CGGAGCGCAC CGGGTGGAAG ATCTGCTCGG ACAATGGCTG GTGGAGCGCC TTCGGTAAGC GCAAGAAGCG CGGCAAGGGT GGCAAGGTCG GTTCACCGGT TCACGACGAC CTCGTGCAAC GGGACTTCAC CGCCGACGGC CCGAACCGGT TGTGGCTGGC CGACATCACC GAACACCGCA CCGGCGAGGG CAAGCTCTAC CTGTGCGCGA TCAAGGACGT GTGGTCGAGG CGGATCGTCG GCTACTCCAT CGACTCACGG ATGAAGTCCC GGCTGGCCGT CAACGCGTTG CACAACGCTG TAGCCCGACG CGGCCGGCTG GCCGGCTGCG TGCTGCACAC CGACCGTGGG TCGCAGTTTC GCAGCCGAAA ATTCGTCCAC GCCCTGCACC AGCATCACAT GACCGGATCG ATGGGCAGAG TCGGCGCCGC CGGCGACAAC GCCGCCATGG AATCGTTCTT CGGGTTGCTG CAGAACAACG TCCTCGACCG GCGGACCTGG ACCACCCGCC AGCAGCTCAG GACCGCGATC GTGACCTGGA TCGAGCGGAC CTACCACCGC CGCCGACGAC AACACTCTCT GTCCCGGTTG ACCCCTATCG AGTACGAGAC CATCATGACC CCACCGGCCA GTCAGGCCGC GTGA
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Protein sequence | MSELAADGIP VAVTCRVLNI ARQPYYRWLG RPVGDAELVA AHRANALVDA HRDDPEFGYR FLVDEARAAG QAMAERTGWK ICSDNGWWSA FGKRKKRGKG GKVGSPVHDD LVQRDFTADG PNRLWLADIT EHRTGEGKLY LCAIKDVWSR RIVGYSIDSR MKSRLAVNAL HNAVARRGRL AGCVLHTDRG SQFRSRKFVH ALHQHHMTGS MGRVGAAGDN AAMESFFGLL QNNVLDRRTW TTRQQLRTAI VTWIERTYHR RRRQHSLSRL TPIEYETIMT PPASQAA
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