| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1921 |
|---|
| Symbol | |
|---|
| ID | 5058383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2196793 |
|---|
| End bp | 2197398 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640474194 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001158761 |
|---|
| Protein GI | 145594464 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.137486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGG CCGGTCACCG TTACCAGGTG CGTTCGCGCG TCGAGCGGTA CCGGGGTCGG
ATCTTCGATG TGGTCACCGA CGAGGTGACC ATGCCCGGTG GCGGCACCGC CCTGCGGGAC
TGTGCCCGAC ACCCGGGCGC GGTATCGGTG GTGGCCTTGG ATGAGGCCGG TCGGGTGGTG
TTGATCCGGC AGTATCGGCA CCCGGTCGGC CGGCACCTGT GGGAGCTGCC GGCCGGCCTG
CTGGACATCG CGGGCGAGGA CCCGGCCGCC GCCGCCGTCC GGGAACTGGC CGAGGAGGCT
GACCTGACCG CAGGTCGCCT CGATGTCCTG GTCGATGTGC ACAGCTCACC CGGGTTCACC
AATGAGTTGG TCCGGGTGTT CCTGGCCCGC GACCTCACCG AGGTGCCGGT CGGCCGGCGG
CACGCCCGGT CCGAGGAGGA AGCCGACCTC GAGATCGTCT GGGTCGCCCT GGACGAGGCG
GTGGGCATGG TGCTGGCTGG GGGGATCACC AACGCCGCGA CGGTGGCCGG GCTGCTCGCC
GCCGCTCGCG CCCGGGACGG GGGCTGGACG GCACTGCGCC GGGCCGGAAC ACCGCTGCCG
CGCTGA
|
|---|
| Protein sequence | MSTAGHRYQV RSRVERYRGR IFDVVTDEVT MPGGGTALRD CARHPGAVSV VALDEAGRVV
LIRQYRHPVG RHLWELPAGL LDIAGEDPAA AAVRELAEEA DLTAGRLDVL VDVHSSPGFT
NELVRVFLAR DLTEVPVGRR HARSEEEADL EIVWVALDEA VGMVLAGGIT NAATVAGLLA
AARARDGGWT ALRRAGTPLP R
|
|---|
| |