Gene Strop_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1889 
SymbolargJ 
ID5058348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2156964 
End bp2158136 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content72% 
IMG OID640474159 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_001158729 
Protein GI145594432 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.262323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA CGACTCCCCG CGGATTCCGG GCGGCCGGAG TGTCCGCCGG GCTCAAGGAG 
GGTGGGGCGG CCGATGTCGC CCTGGTCGTC AACGACGGCC CGCACGCCGG GGCGGCCGGT
GTCTTCACCA ACAACCGGGT GAAGGCCGCA CCGGTGCTCT GGACCCAGCA GGTCGTCCAG
GGCGGTCTGG TCCGCGCCGC GGTACTCAAC TCGGGCGGCG CCAACGCCTG CACCGGCCCC
GGCGGCTTCC AGGACACCCA CGCCACCGCG GAGCACACCG CGGCGGTGCT GACCGCCGTC
GCCCCCGGCT CGAGCCTCGG TGCGGGTGAG GTGGCCGTCT GCTCCACCGG TCTGATCGGC
GAGCGGCTGC CCATGGACCG GCTCCTGCCC GGAGTGCGTA CGGCAGTCGG GACGTTGAGC
CAGGATGGGG GCCCGGCAGC CGCCGAAGCC ATCATGACCA CCGACTCCCG GCCGAAGAAC
GGGGTCGCAC ACGGTGCGGG TTTCACCGTG GGTGGCATGG CCAAGGGCGC GGGCATGCTC
GCCCCGGCGA TGGCCACGAT GCTCAGCGTG CTCACCACCG ACGCGGTGGC TGACCCGGAG
ACCCTGGACG CGGCGTTGCG GGCCGCCTGC CGGGTCACCT TCGACCGGGT CGACTCGGAC
GGGTGCATGT CCACCAACGA CACGGTGCTA CTGCTGGCCA GCGGTGCGAG CGGCGTCGTG
CCCACCGAGG CCGAGCTGAC CGCCGTGGTC ACCGCCGTCG CTCACGACCT CGCGCAGCAG
CTCGTCGCCG ACGCCGAGGG CGCCACCAAG CAGATCACGA TCGACGTGGT CGGCGCGGCG
AGCGAGGACG ACGCCGTCGA GGTGGGCCGG ACCGTGGCCC GGAACAACCT GGTCAAGACC
GCGCTGTTCG GCAACGACCC GAACTGGGGA CGAATCCTCG CCGCGGTCGG CACCACCGCT
GCGGCGTTCG AGCCAGAGCG GGTCGATGTG GCCGTGAACG GGGTGTGGGT GTGCCGGGAC
GGCGCCGCCG CCGAGGATCG GTCGAAGGTC GACCTCGGGG GCGTGGACGT CACCATCTGC
ATCGACCTGC GGGCAGGCGC GGCCGCGGCG ACAATCTGGA CCAACGACCT GTCACACGGG
TACGTGCACG AGAACTCGGC GTACTCGTCG TGA
 
Protein sequence
MSVTTPRGFR AAGVSAGLKE GGAADVALVV NDGPHAGAAG VFTNNRVKAA PVLWTQQVVQ 
GGLVRAAVLN SGGANACTGP GGFQDTHATA EHTAAVLTAV APGSSLGAGE VAVCSTGLIG
ERLPMDRLLP GVRTAVGTLS QDGGPAAAEA IMTTDSRPKN GVAHGAGFTV GGMAKGAGML
APAMATMLSV LTTDAVADPE TLDAALRAAC RVTFDRVDSD GCMSTNDTVL LLASGASGVV
PTEAELTAVV TAVAHDLAQQ LVADAEGATK QITIDVVGAA SEDDAVEVGR TVARNNLVKT
ALFGNDPNWG RILAAVGTTA AAFEPERVDV AVNGVWVCRD GAAAEDRSKV DLGGVDVTIC
IDLRAGAAAA TIWTNDLSHG YVHENSAYSS