| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1873 |
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| Symbol | |
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| ID | 5058332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2141978 |
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| End bp | 2142958 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640474143 |
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| Product | response regulator receiver |
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| Protein accession | YP_001158713 |
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| Protein GI | 145594416 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.402703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCCCG ACGGGGATCG CCAGGACCTC ATTCTCGTCG TTGACGACGA CGAGGACATC
GCCCGGTTCG TCGAGTTCAA CCTGCGGTTG CATGGTTACG AGGTGATCCA TGCCGGGGAC
GGCCAGGAGG CACTCGAGGT GATTGCGCGG CACCGCCCCG ACCTGGCCGT GGTCGATCTG
ATGATGCCCC GCGTCGACGG CTTGGAACTG ACCCGGCGGC TACGTGCCGA CCCGATGACC
GCCGTTCTGC CGGTGATCAT GCTGACCGCC AAGGGGATGA CCGTGGACAA GGTGCACGGC
CTCAGTGCCG GTGCCGACGA CTACCTGGTC AAGCCCTTCG ACACCGCCGA GTTGGTGGCC
CGGGTCAGCT CCACGCTGCG CCGGAACAAG GAGTTCCGTG AGGTCTCGCC GCTGACCGGG
CTACCCGGCA ACAGCCGGAT CCGCCGGGAG ATCGCCGACC GGATTCGGGT CGGATCCGAC
TACGCGGTCG GGTACATCGA CATCGACCGT TTCAAGAGTG TCAATGACGT TTACGGGTTC
GTCCGCGGCG ACGACTTCAT CTCCGCGTTG GCCCGCAGCC TGCACCGGGC GGTCGTCTCG
GTGGGGCTTC CCGCGGCCTT CCTGGGTCAC GTCGGCGGCG ACGACTTCAT CTTCGTCAGC
ACGCCGGAAC AGGTCCGGCA GCTGACCTCG CAGGTCTCCG CGGACTTCGA GCAGGCGGCC
GACGCGCTGT ACGACCCGCC TGACGCCGCC CGCGGCTACG TGGAACTCAA GGACCGACGT
GGCAACCTAC GCCGCGCTGC GTTGGTCACC CTCTCGATCG GCGTCTCGGT CTCGGACGCC
GACAAGCGTC TCACGAATTC ACTGGCGGCG ATGACGATCG CCTCCGAGAT GAAGTCGGTG
GCCAAGAGCC AGCCGGGGTC GTACGTGGCG GTGGACCGGC GTCGCGGAGT GTCGGATTCG
AGTCATCGTT CTGTGAAGTA G
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| Protein sequence | MEPDGDRQDL ILVVDDDEDI ARFVEFNLRL HGYEVIHAGD GQEALEVIAR HRPDLAVVDL
MMPRVDGLEL TRRLRADPMT AVLPVIMLTA KGMTVDKVHG LSAGADDYLV KPFDTAELVA
RVSSTLRRNK EFREVSPLTG LPGNSRIRRE IADRIRVGSD YAVGYIDIDR FKSVNDVYGF
VRGDDFISAL ARSLHRAVVS VGLPAAFLGH VGGDDFIFVS TPEQVRQLTS QVSADFEQAA
DALYDPPDAA RGYVELKDRR GNLRRAALVT LSIGVSVSDA DKRLTNSLAA MTIASEMKSV
AKSQPGSYVA VDRRRGVSDS SHRSVK
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