| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1853 |
|---|
| Symbol | pyrB |
|---|
| ID | 5058312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2118256 |
|---|
| End bp | 2119182 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474123 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001158693 |
|---|
| Protein GI | 145594396 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.822345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.502816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTC ACCTGCTCTC CAGCGCCGAC CTGGACGCTG GTACCGCCCT CCAGATCCTG
GACACCGCCG CCGAGATGGC CACCGTGGCC GGGCGGGAGG TCAAGAAGCT GCCGGCGCTG
CGCGGTCGGA CCGTGGTGAA CCTCTTCTAC GAGGACTCCA CCCGGACTCG GATCTCCTTC
GAGGCCGCCG CCAAGCGGCT CAGTGCCGAC GTGATCAACT TTTCGGTCAA GGGGTCCAGC
GTCGCCAAGG GTGAGAGTCT GAAGGACACC GCACTCACCC TCCAGGCGAT GGGCGCCGAC
GCCGTCGTCG TCCGGCACCC CGCCTCCGGT GCCCCGTACC AGCTGGCCGA CTGGGTCGAC
GGCTCCGTCG TCAACGCCGG CGACGGTACG CACGAGCACC CCACCCAGGC GCTACTCGAC
GCGTACACGA TGCGTTCCCG GCTGGGCCGA CTCGCCGGCC TGTCGGTGGC GGTGGTCGGT
GACGTGCTGC ACAGCCGGGT GGCACGCTCC AACGTCCTGC TGCTCTCCAC CCTCGGTGCC
AAGGTCACCC TGGTCGGTCC GCCTCCGCTG ATCCCGGTGG ACATCGCGGC GGCCCTCGCG
CCCAGCGCCG CCGTCTGCTA CGACCTGGAC GCGGTGCTGC CGCAGTCGGA CGTGGTCATG
ATGCTGCGGG TGCAGCGGGA GCGCATGAAC GACTCCTACT TTCCGTCCGC CCGTGAGTAC
GCCCGCCGTT ACGGCCTGGA CGGCTCACGG ATGCGGCGGC TGCCGGAGCA CGCGATCGTG
ATGCATCCCG GTCCGATGAA CCGGGGCATG GAGATCACCT CCGAGGTGGC CGACTCGCCC
CGCTCCACCA TTGTCGAACA GGTCGCCAAC GGCGTCTCCG TCCGGATGGC CGTCCTCTAC
CTGCTACTCG GAGGGAACAA CCGGTGA
|
|---|
| Protein sequence | MIRHLLSSAD LDAGTALQIL DTAAEMATVA GREVKKLPAL RGRTVVNLFY EDSTRTRISF
EAAAKRLSAD VINFSVKGSS VAKGESLKDT ALTLQAMGAD AVVVRHPASG APYQLADWVD
GSVVNAGDGT HEHPTQALLD AYTMRSRLGR LAGLSVAVVG DVLHSRVARS NVLLLSTLGA
KVTLVGPPPL IPVDIAAALA PSAAVCYDLD AVLPQSDVVM MLRVQRERMN DSYFPSAREY
ARRYGLDGSR MRRLPEHAIV MHPGPMNRGM EITSEVADSP RSTIVEQVAN GVSVRMAVLY
LLLGGNNR
|
|---|
| |