Gene Strop_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1828 
SymbolalaS 
ID5058287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2092523 
End bp2095201 
Gene Length2679 bp 
Protein Length892 aa 
Translation table11 
GC content70% 
IMG OID640474098 
Productalanyl-tRNA synthetase 
Protein accessionYP_001158668 
Protein GI145594371 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.222093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGG CGGAGATCAG GCGGCGGTAC CTCGCGCACT TCGAGGCGAA CGGTCACGCC 
GTGGTGCCGT CCGCTCCGCT GCCCGCCATC AGCGACCCGA ACCTGCTGTT TGTCGCCGCC
GGCATGATGC AGTTCGTCCC CTACTTCCTG GGGCAGCAGA CCGCTCCCTA CAAGCGGGCC
GTCAGCGTGC AGAAGTGCCT CCGTACGCCG GATATCGACG AGGTGGGCAA GACCAGCCGG
CACGGCACGT TCTTCCAGAT GAACGGCAAC TTCTCGTTTG GGGACTACTT CAAGGACGAG
GCGATCCCGC TCGCCTGGGA GCTGTCCACC AAGCCGGTTG ACGCCGGGGG ACTCGGACTC
GACCCGGATC GGATCTGGCC GACGGTCTAC CTCGACGACG ACGAGGCGTT CCAGATCTGG
CGATCGGTCG GGGTGCCGGC GGATCGGATC GTGCGTCGCG GCAAGGCTGA CAACTTCTGG
TCGATGGGCA TTCCCGGGCC GTGCGGGCCC TGCTCCGAGC TGTTCTACGA CCGTGGCCCC
GAGTACGGCC GGGAGGGCGG TCCGGAGGTT GACGAGGATC GGTACCTGGA GTTCTGGAAC
CTCGTCTTCA TGCAGTTCGA GCGGGGACCG GGCACCGGCA AGGAGGACTA CCCGATCCTC
GGTGACCTGC CGGCGAAGAA CATCGACACC GGGATGGGCC TGGAGCGGAT GGCCTCCATC
CTCCAGGGCG TGGACAACCT CTACGAGATC GACGAGGTGC GGCCGATCCT GGCCAAGGCC
GCCGAGCTGA CCGGCAAACG GTATGGCGCG CACTCCGGTC AGGTCGCCAG CGAGTCGCAC
CCGGATGACG TCCGGCTGCG GGTCGTCGCC GACCATGTCC GCACCGCCCT GATGTTGATC
GGTGACGGGG TGATCCCGAG TAATGAGGGG CGGGGCTACG TGCTGCGCCG CATCATGCGC
CGGGCGATCC GTTCGATCCG GCTGCTGGGC TGGCAGGAAC GGGCGATGCC CGAGCTGCTG
CCGGTGGCCC GCGACTGCAT GTCCGCGTCA TACCCGGAGC TGGCGACCGA CTTTGGCCGG
ATCGCCGACT ACGCGTACGC GGAGGAGGAT GCGTTCCTGT CCACGCTGCG TGCCGGCACC
ACGATCCTGG ACACCGCCAT CGCCGAAACC CGTACCGCGG GCCGGCGGGC GATCTCCGGT
GCGAAGGCGT TTCAGCTGCA CGACACGTAC GGCTTCCCGA TCGACCTGAC CCTGGAGATC
GCGAGCGAGC AGGGTCTACA GGTCGACGCC GAGGGTTTCC GTCGGCTGAT GGCCGACCAG
CGGGCTCGGG CGAAGGCCGA CGCGCAGGCC CGTAAGACGG GGCACGTGGA CCTGTCCGCG
TACCGGACGG TGCTGGACGA GGGCGGCCCG GTCACCTTCA CCGGCTACCA GGAGGTCTCC
CGCGAGTCGA CGGTGCGGGC GGTGCTCGGC GCGGCCAGTC CGCACGCCGC GGCGGTGGAG
GGCGAAACGG TCGAGCTGGT CCTCGACACC ACCCCGTTCT ACGCCGAGGG TGGTGGCCAG
CAGCCGGACC TGGGCGTGAT CACCGTCGGT GGGGGCCAGG TGGAGGTCCT CGACGTGCAG
CAGCCGGTAC CGGGGTTGAT CGTCCACCGG GCCCGGGTGC TGCGGGGTGA GGTGCGCGTG
GGCGAGACCG GCTTCGCCGA GATCGACACT GATCGCCGTC GGGCGATCTC CCGGTCGCAC
ACCGCGACCC ACCTCGTGCA CCAGACCATG CGCAACTTCC TCGGTGAGTC CGCCACCCAG
GCCGGTTCGC TGAACGCACC GGGGCGGCTT CGGTTCGACT TCAACACCCC GACCGGGGTG
GCACCGAGCG TCCTGCGGGA TGTGGAACAG CAGGTCAACG AGGCGCTCCT CGCCGACCTG
GAGGTGCGTG CGTTCGTTAC CTCGCTGGCC GAGGCGCGGC GTATCGGTGC GATGGCGCTC
TTCGGCGAGA AGTACGGCGA GCAGGTGCGA GTCGTCGAGG TCGGTGACTA CGCGCGAGAG
CTGTGCGGTG GTACCCACGT GGGCCGTTCC GGCCAGCTCG GCCTGGTGAA GATCCTTTCT
GAGTCGTCGA TCGGGTCCGG GGTTCGCCGG GTCGAGGCGT TGGTCGGGAT TGACGCGTTC
AACTTCCTTG CCCGCGAGCA CCTGCTCGTC GCCCGCCTCG CCGAGCTGTA CCGGGTGCCA
TCCGACCAGG TCGCGGAGCG GGTGGAGCAG ACCGTCACCC AGCTGCGCGA CGCCGAGAAG
GAACTGGAGA AGCTCCGCGC GCAGCTGGTG CTCGGCGGCG CGGCCGCCCT CGCTGCCCAG
GCGAGCGAGG TGCGTGGGGT GGCGTACGTC GGGACCGAGG CGCCCGAGGG TGCGGCCGGC
AACGATGTGC GGACCCTCGC GCAGGAGATC CGGAGCCGGA TCGATCCGGC GCGTCCTGCG
GTGGTCGCGG TGGCGGCCCG GGCGAACGGC AAGGCTTCCC TGGTGGTGGC GGTCAACCCA
GCGGCGCGCA GTCAGGGGCT GTCAGCGGCG GATCTGGTCA AGGTAGCCTT CGCCGGCCGG
GGTGGGGGCA GCCCCGAGTT GGCCCAGGGG GGCGGTCTGC CGGCGGCGGA GGCGCCGGGG
TTGCTTCGGA CCGTCGAGAA TGCCATCGCC GGGGCGTAA
 
Protein sequence
MKTAEIRRRY LAHFEANGHA VVPSAPLPAI SDPNLLFVAA GMMQFVPYFL GQQTAPYKRA 
VSVQKCLRTP DIDEVGKTSR HGTFFQMNGN FSFGDYFKDE AIPLAWELST KPVDAGGLGL
DPDRIWPTVY LDDDEAFQIW RSVGVPADRI VRRGKADNFW SMGIPGPCGP CSELFYDRGP
EYGREGGPEV DEDRYLEFWN LVFMQFERGP GTGKEDYPIL GDLPAKNIDT GMGLERMASI
LQGVDNLYEI DEVRPILAKA AELTGKRYGA HSGQVASESH PDDVRLRVVA DHVRTALMLI
GDGVIPSNEG RGYVLRRIMR RAIRSIRLLG WQERAMPELL PVARDCMSAS YPELATDFGR
IADYAYAEED AFLSTLRAGT TILDTAIAET RTAGRRAISG AKAFQLHDTY GFPIDLTLEI
ASEQGLQVDA EGFRRLMADQ RARAKADAQA RKTGHVDLSA YRTVLDEGGP VTFTGYQEVS
RESTVRAVLG AASPHAAAVE GETVELVLDT TPFYAEGGGQ QPDLGVITVG GGQVEVLDVQ
QPVPGLIVHR ARVLRGEVRV GETGFAEIDT DRRRAISRSH TATHLVHQTM RNFLGESATQ
AGSLNAPGRL RFDFNTPTGV APSVLRDVEQ QVNEALLADL EVRAFVTSLA EARRIGAMAL
FGEKYGEQVR VVEVGDYARE LCGGTHVGRS GQLGLVKILS ESSIGSGVRR VEALVGIDAF
NFLAREHLLV ARLAELYRVP SDQVAERVEQ TVTQLRDAEK ELEKLRAQLV LGGAAALAAQ
ASEVRGVAYV GTEAPEGAAG NDVRTLAQEI RSRIDPARPA VVAVAARANG KASLVVAVNP
AARSQGLSAA DLVKVAFAGR GGGSPELAQG GGLPAAEAPG LLRTVENAIA GA