Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1816 |
Symbol | |
ID | 5058275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2078138 |
End bp | 2078968 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474087 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_001158657 |
Protein GI | 145594360 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCG GAGAGCGGCA ACGCGCGGCG GCTCGCGCTC GGCTCGAGAA GGAGATGGCC GAGCGGACCG CCCAGGCTCG TCGGCGTCGA CAGACCCAGG CGATCGTCGG GGCGAGCGCG GCGCTCCTCC TGGTGGTCGC CGGCACCGTC TGGCTGGTGT CGAGCCTCGG CGACGACTCG TCGACCGACT CGACCACCAC CGCCGGCGCC GCCGAGTGCG CCTTCACCGA GATCCCCGCC GACCAGCGGA TCCCACAGAT CAAGGACGTC GGCCTGCCGA GCGACCAACA GCCGAACACC GGGACCCAGA CCCTCACAAT CGACACGAAC CTCGGGCAGA TCACGGCCAA GGTCGACCGG TCCCAGACGC CGTGCACCAG CGCCAGCTTC ACCCACCTCG CCGAGCAGAA CTTCTTCGAC AACACGAAGT GCCACCGCCT CGTCACCGAG GGAATCAAGG TGCTCCAGTG CGGTGACCCG AGCGCGACCG GCGATGGTTG GCGGGAAACC GACGGCACCG GCGGGCCGAG CTACCGGCTG GCCGAGGAGA ACCTGCCCAC GGACAAGCGG CCCCCGTACC CGGAGGGCGT TATCGCGATG GCCAACTCCG GCGCACCGGG GAGCACCGGC AGCCAGTTCT TCATCGTCTA CGGCGACTCG CCGCTCGACC CGAACTACAC CGTCCTCGGC ACGATCACCG GTGGGCTGGA CATCGTCAAG GAGGTGGCGG CGGCCGGCGA CGACGAGGCC TATGCGCAGC AGGCCGGCGG TGGACACCCG AAGAAGGAAA TCACCATCAC CGACCTCACG ATGAGCGCAC CCCAGGGCTG A
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Protein sequence | MSSGERQRAA ARARLEKEMA ERTAQARRRR QTQAIVGASA ALLLVVAGTV WLVSSLGDDS STDSTTTAGA AECAFTEIPA DQRIPQIKDV GLPSDQQPNT GTQTLTIDTN LGQITAKVDR SQTPCTSASF THLAEQNFFD NTKCHRLVTE GIKVLQCGDP SATGDGWRET DGTGGPSYRL AEENLPTDKR PPYPEGVIAM ANSGAPGSTG SQFFIVYGDS PLDPNYTVLG TITGGLDIVK EVAAAGDDEA YAQQAGGGHP KKEITITDLT MSAPQG
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