| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1815 |
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| Symbol | |
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| ID | 5058274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2075530 |
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| End bp | 2077977 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640474086 |
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| Product | RelA/SpoT family protein |
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| Protein accession | YP_001158656 |
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| Protein GI | 145594359 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.093472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCCGA CAGGCGACGG CTCGGTGACC GACCGCGGTG GTGGCTCCCG TTCCGAGGTA
GGTCCTGGTG GTGACGCCGG GGTAACGGAC GCCAGCCGCA CCAGCCCGGA CGCGGGGAGC
GAGGGGGCGG TCGTCCCGAA GCGGGGTGAT CTCTCGCCCG AGACCGCTCT CAGCGGTGGG
TTCGCGCTCT CCAGCGCGCC GACGGGGCGA CGGGTGCGGG CTCGGCTGGC CCGGTTCAAT
GCGCCCTGGC AGTCCTCGCA GGTCAGCGAG GTGCTGGAGC CGCTGATCTC GAGTCATCGG
GAGAATCACC CGAAGGCCGA CGCGCGGCTG TTGCAACGCG CCTTCGACAC GGCGGCCCGC
TGGCACTCCG GCCAGTACCG TAAGTCCGGC GACCCCTACA TCACCCACCC GCTCGCGGTG
GCCACCATCC TGGCCAATCT GGGAATGGAT ACCACCACGC TGGTCGCGGC GCTGCTGCAC
GACACGATCG AGGACACCGA GTACACGCTT GACCAGATGC GGGCCGACTT CGGCGGTGAG
GTGGCGCTGC TGGTTGACGG GGTGACCAAG CTCGACAAGG TCAAGCTGGG CGACGCGGCG
AAGGCGGAGA CGATTCGCAA GATGGTCGTC GCCATGGCGA AGGACCCGCG GGTCCTGGTG
ATCAAGCTGG CCGACCGGCT GCACAACATG CGTACCCTGA TCTTCCTGCC GCGGCCGAAG
CAGGAGCAGA AGGCCAAGGA GACGCTGGAG ATCCTGGCCC CACTGGCACA TCGCCTGGGA
ATGAACACGA TCAAGTGGGA GCTGGAGGAT CTGGCCTTCG GAACCCTGTT CCCGAAGCGG
TTCGAGGAGA TCAACCGACT GATCGGGGAG CACCAGCCGC AGCGGGAGGC GCTGCTGCGG
CAGGTGACCA GGAAGGTCGG CACCGACCTG AAGTCAGCCA AGATCAGGGC GGAGGTGACC
GGTCGGCCGA AGCACCTGTA CTCGATCTAC CAGAAGATGA TCGTGCGGGG GCGGGATTTC
AACGACATCT ACGACCTGGT GGGTGTGCGG ATCCTGGTCG ACACGGTGCG GGACTGCTAT
GCGGCGTTGG GTGTGATTCA CGCGAACTGG CAGCCGGTGC CGGGCCGGTT CAAGGACTAC
ATCGCGATGC CGAAGTTCAA CATGTACCAG TCGTTGCACA CGACGGTGAT CGGGCCCACC
GGCAAGCCGG TGGAGATGCA GATCCGCACG TACGCGATGC ACCGTACCGC CGAGTTCGGT
ATCGCCGCGC ACTGGAAGTA CAAGGAGCAC AAGGGCACCC AGATCGTCGG CCCGCCGGCG
CACATCGATG AGATGACCTG GCTGCGGCAG CTGCTGGACT GGCAGCGGGA GGCGGCCGAC
CCGAGCGAGT TCCTGGACGC GCTGCGCTTC GACCTGTCCA GCCAGGAGGT GTACGTCTTC
ACCCCGAAGG GTGACGTCTT TCCGTTGCCG ACAGGGTCGA CGCCGGTGGA CTTCGCGTAC
GCGGTGCACA CCGAGGTGGG ACACAAGTGC ATCGGGGCGC GGGTCAACGG CAAGCTGGTG
CCGTTGGAGT CGACGCTGTC CAACGGCGAT GTGATCGAGA TCTTCACCTC GAAGTCGGAG
ACGGCCGGCC CGACCCAGGA CTGGCTGGGG TTCGTCAAGA GCCCGCGGGC GCGTACGAAG
ATTCGGCAGT ACTTCAACAA GGAGCGGCGC GAGGAGGCGA TCGAGGCCGG CAAGGACGCG
ATCGTCAAGG CGATGCGCAA GCAGGGCATG CCGCTGCAGC GGATGCTCAG CTCCGACAAC
CTGATGGCGA TCGCCCGGGA TCTGCACCTG GCCGATGTCG CCTCGCTCTA CGCGGCGGTC
GGTGACAGCC ACGTCTCCGC TCAGTCGGTG GTGCAGAAGC TGATGGCCTC CTACGGCGGC
GAGGAGGGCG CGGTCGAGGA CATCGCCGAG ACCGCCGTGG CCACTCGTCC GCCGCGGAGC
CGGGCCAGCA GCAACGACCC GGGGGTCGTC GTCCGGGGCG TCAGCGATGT GTGGATCAAG
CTGGCCCGTT GCTGCACCCC GGTTCCGCCG GATACGGTTT TCGGGTTTGT CACCCGCTCC
GGCGGGGTGA GCGTGCACCG GGACGACTGC GCCAACGCCG AGGACCTCAA GGCACAGGGG
GAGCGGGTCG TGGAGGTGGG CTGGAAGCTC ACCAGCGCGT CGACCTTCCT CGTCGCCATC
CAGGTCGAGG CGCTCGACCG GCACAAGCTG CTCACCGACG TGACCCTGGT GCTCTCCGAC
GAGCGGGTCA ACATCCTCTC GGCGACCGTG ACGACCACGC GGGACCGGGT GGCGGTGAGC
CGGTTCAGCT TCGAGATGGC CGATCCCAAG CACTTGGGGC ACCTGTTGGC CGCAGTGCGT
AAGGTCGACG GTGTCTTCGA CGCCTACCGG GTCACCTCCG GATCCTGA
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| Protein sequence | MHPTGDGSVT DRGGGSRSEV GPGGDAGVTD ASRTSPDAGS EGAVVPKRGD LSPETALSGG
FALSSAPTGR RVRARLARFN APWQSSQVSE VLEPLISSHR ENHPKADARL LQRAFDTAAR
WHSGQYRKSG DPYITHPLAV ATILANLGMD TTTLVAALLH DTIEDTEYTL DQMRADFGGE
VALLVDGVTK LDKVKLGDAA KAETIRKMVV AMAKDPRVLV IKLADRLHNM RTLIFLPRPK
QEQKAKETLE ILAPLAHRLG MNTIKWELED LAFGTLFPKR FEEINRLIGE HQPQREALLR
QVTRKVGTDL KSAKIRAEVT GRPKHLYSIY QKMIVRGRDF NDIYDLVGVR ILVDTVRDCY
AALGVIHANW QPVPGRFKDY IAMPKFNMYQ SLHTTVIGPT GKPVEMQIRT YAMHRTAEFG
IAAHWKYKEH KGTQIVGPPA HIDEMTWLRQ LLDWQREAAD PSEFLDALRF DLSSQEVYVF
TPKGDVFPLP TGSTPVDFAY AVHTEVGHKC IGARVNGKLV PLESTLSNGD VIEIFTSKSE
TAGPTQDWLG FVKSPRARTK IRQYFNKERR EEAIEAGKDA IVKAMRKQGM PLQRMLSSDN
LMAIARDLHL ADVASLYAAV GDSHVSAQSV VQKLMASYGG EEGAVEDIAE TAVATRPPRS
RASSNDPGVV VRGVSDVWIK LARCCTPVPP DTVFGFVTRS GGVSVHRDDC ANAEDLKAQG
ERVVEVGWKL TSASTFLVAI QVEALDRHKL LTDVTLVLSD ERVNILSATV TTTRDRVAVS
RFSFEMADPK HLGHLLAAVR KVDGVFDAYR VTSGS
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