Gene Strop_1783 details

Gene Information

• Locus tag: Strop_1783
• Symbol: thrS
• ID: 5058242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: +
• Start bp: 2036972
• End bp: 2038987
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640474054
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001158624
• Protein GI: 145594327
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.491934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTCCGCAC CCCGTAACCC CGTCGTGGCC GACCCCGTTG TCGTGGCCGC CGGGACGACG 
GCGGCCGACG CGGTCGCGGC GGCCGGACTG CCGATGACCG GTCGCGGTGC GGTCGTCGTG 
GTGCGGGACC CGCGGGGCCA GCTTCGCGAC CTTGACTGGA CCCCGGAACA GGAGACCATG 
GTCGAGCCGG TCGGCATCGA CACCCCGGAC GGGCTGGCCG TGCTCCGGCA CTCCACGGCC 
CATGTGCTCG CCCAGGCCGT GCAGGATCTC TTTCCCGAGG CGAAGCTGGG CATCGGCCCG 
CCGATCGAGA ATGGCTTCTA CTACGACTTC GCGGTTGACC AGCCGTTCCA GCCCGAGGAC 
CTGACGAAGC TGGAAAAGCG GATGCAGGAG ATCATCAAGT CTGGTCAGCG GTTCCGCCGC 
CGCCGCTTCC GGGACCTGGA CGAGGCCCGT GGCGAACTCG CGGCTGAGCC GTTCAAACTG 
GAGCTGATCG AGCTCAAGGG CGACGGGCTG GACTCCTCCC AGGTGATGGA GGTTGGCGGC 
GGCGAACTGA CCAGCTACGA CAATCTCGCC GCCGACGCGG ACAAGGTCTG CTGGTCGGAT 
CTGTGCCGCG GTCCGCACCT GCCGAACACC CGACTGATCG GGGCGTTCAA GCTGATGCGG 
TCGGCCGCTG CATACTGGCG TGGCTCGGAG AAGAACCCAC AGCTACAGCG GGTGTACGGC 
ACCGCGTGGC CGACCCGCGA CGAGCTGAAG GCGTACCTGC GGTTGTTGGA GGAGGCCGCC 
CGGCGTGACC ACCGCAAGCT GGGTGCGGAC CTCGACCTGT TCAGCTTCCC CGATGAGATC 
GGCTCCGGCC TCCCGGTGTT TCACCCCAAG GGCGGCGTGC TCAAGCGGAC GATGGAGGAC 
TACGTCCGGT CCCGGCACAT CGAGGAGGGT TTCGACTACG TCGGCACCCC GCACATCTCG 
AAGGAAGGCC TCTTCCACAC CTCGGGCCAC CTGCCGTACT ACGCCGACGG GATGTTCCCG 
CCCATGCAGT TCGAAGGGGC GGACTACTAC CTCAAGGCGA TGAACTGCCC GATGCACAAC 
CTGATCTACC GGTCGCGCGG GCGTTCCTAC CGGGAACTGC CGATGCGGCT GTTCGAGTTC 
GGCTCGGTCT ACCGGTACGA GAAGTCCGGC GTCATCCACG GGTTGACCCG GGTGCGTGGG 
TTCACCCAGG ACGACTCGCA CTCCTACTGC ACCAAGGAGC AGGCACCAGC GGAGATCAAG 
CACCTGCTGG CCTTCGTGCT CGGCCTCCTA CAGGACTTCG GTATCACCGA CTTCTTCCTC 
GAACTGTCCA CCCGCGACGA CACCAAGCCG GACAAGTTCG TCGGTTCCGC CGAGGACTGG 
GCGACGGCGA CGGCGGTGCT GGAGCAGTGC GCCCGCGACA CTGGGCTCGA GCTGGTGCCG 
GACCCGGGGG GTGCGGCCTT CTACGGCCCG AAGATCTCGG TCCAGGCCAA GGACGCCATC 
GGCCGTACCT GGCAGATGTC GACGATCCAG TACGACTTCA ACCAGCCGGC GGGCTTCGGG 
CTGGAGTACC AGGCAGCCGA CGGTACCCGC CAGCAGCCGA TCATGATTCA CTGCGCGAAG 
TTCGGTTCGA TCGAGCGCTT CATCGGCGTA CTCACCGAGC ACTACGCCGG AGCGTTCCCG 
GCCTGGTTGG CGCCGGTGCA GGTGGTCGGC ATCCCGATCC GCGCAGAGCA TACCGAGTAC 
CTGGACGGCT TCGTCGCCGC ACTGCGCGCC GCGGGTATCC GGGCCCAGGT CGACGCCGGT 
GACGACCGGA TGCAGAAGAA GATCCGCACC GCCCAGCAGC AGAAGATCCC GTTCATGGTG 
ATCGCTGGCG ACGACGACGT GGCGGCGGGC ACCATGTCGT TCCGCTACCG GGACGGCTCG 
CAGCGTAACG GTGTGCCGGC GGCCGAGGCG GTCAACCACG TCCTCGATGT GGTCAACTCC 
CGCGCCAACC AGGGCCCCTC CGCTGCCGAG GGGTGA 

 

Protein sequence

MSAPRNPVVA DPVVVAAGTT AADAVAAAGL PMTGRGAVVV VRDPRGQLRD LDWTPEQETM 
VEPVGIDTPD GLAVLRHSTA HVLAQAVQDL FPEAKLGIGP PIENGFYYDF AVDQPFQPED 
LTKLEKRMQE IIKSGQRFRR RRFRDLDEAR GELAAEPFKL ELIELKGDGL DSSQVMEVGG 
GELTSYDNLA ADADKVCWSD LCRGPHLPNT RLIGAFKLMR SAAAYWRGSE KNPQLQRVYG 
TAWPTRDELK AYLRLLEEAA RRDHRKLGAD LDLFSFPDEI GSGLPVFHPK GGVLKRTMED 
YVRSRHIEEG FDYVGTPHIS KEGLFHTSGH LPYYADGMFP PMQFEGADYY LKAMNCPMHN 
LIYRSRGRSY RELPMRLFEF GSVYRYEKSG VIHGLTRVRG FTQDDSHSYC TKEQAPAEIK 
HLLAFVLGLL QDFGITDFFL ELSTRDDTKP DKFVGSAEDW ATATAVLEQC ARDTGLELVP 
DPGGAAFYGP KISVQAKDAI GRTWQMSTIQ YDFNQPAGFG LEYQAADGTR QQPIMIHCAK 
FGSIERFIGV LTEHYAGAFP AWLAPVQVVG IPIRAEHTEY LDGFVAALRA AGIRAQVDAG 
DDRMQKKIRT AQQQKIPFMV IAGDDDVAAG TMSFRYRDGS QRNGVPAAEA VNHVLDVVNS 
RANQGPSAAE G