Gene Strop_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1736 
Symbol 
ID5058195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1990687 
End bp1991484 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID640474007 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001158577 
Protein GI145594280 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.956019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.890937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGG CGACGTGGAA CGTCAACTCG GTGAAGGCCC GCCTGCCCCG GCTGCTCGAC 
TGGCTGGCGG GCACGAACCC GGATGTCGTC TGCCTCCAGG AGACCAAGTG CCCGGACGGC
GCGTTCCCGG TCGCCGAGGT TGGCACGCTC GGCTACACGG TCGCCAGCCA CAGTGACGGC
CGGTGGAACG GGGTCGCCAT TCTGTCCCGG GTCGGCCTGA CCGATGTCAC CGTCGGCTTC
CCCGACGAGC CGGGCTTTCC CGATCCGGAG GCGCGCGCCC TCTCCGCCAC CTGCGCCGGA
CTACGGGTCT GGTCGGTCTA CGTGCCCAAC GGCCGAACCC TCGACGACCC GCACTACGCG
TACAAGCTGG CCTGGCTCGG CGCGCTACGG GACACGCTGG AGGTTGAGCT GACCGGGGGC
GCACCGTTGG CGGTGTGCGG CGACTTCAAC GTGGCCCCCA CCGACTCAGA CGTGTGGGAT
CCAGCCCTGT TCACCGGCTC CACCCACGTC ACGCCCGCCG AACGGACCGC ACTCGCGGCG
TTGCGCGATC TGGGCCTCGA CGACGTGGTG CCGACTCCGA TGAAGGGCCC GCATCCGTTC
ACCTACTGGG ACTATCGGGC CGGGATGTTC CATCAGAACA AGGGCATGCG GATCGACCTG
GTGTACGCCT CGGCGCCGTT CGCCCGCGTG GTCCGGGCCG CGTACGTGGA CCGGGAGGCC
CGCAAGGGCA AGGGTCCCTC CGACCATGCC CCGATCGTCG TGGACGCCGA CCTTGTCCCG
GCGGTGGAGA CATTCTGA
 
Protein sequence
MRLATWNVNS VKARLPRLLD WLAGTNPDVV CLQETKCPDG AFPVAEVGTL GYTVASHSDG 
RWNGVAILSR VGLTDVTVGF PDEPGFPDPE ARALSATCAG LRVWSVYVPN GRTLDDPHYA
YKLAWLGALR DTLEVELTGG APLAVCGDFN VAPTDSDVWD PALFTGSTHV TPAERTALAA
LRDLGLDDVV PTPMKGPHPF TYWDYRAGMF HQNKGMRIDL VYASAPFARV VRAAYVDREA
RKGKGPSDHA PIVVDADLVP AVETF