| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1732 |
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| Symbol | |
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| ID | 5058191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1984846 |
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| End bp | 1988541 |
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| Gene Length | 3696 bp |
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| Protein Length | 1231 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474004 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001158574 |
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| Protein GI | 145594277 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.664883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGG GTCTCGGCCC TTCGGGCTGC CTGCGCGCGG CGACAGGTCG AACCGCTCCC
TCCGGAGTCG ACGCCGCAAC GGGGGAGGTC CAGGCGGACG CTGGCCCGGC AACAGTCGGC
CCGGCGGACG CCACCTGGGC TGACGCTGGC CCGGCCGTCG CGTCGGCGGC CCCGACGGCG
AGCAGCGGGC TGACGACCGC GACCGCGACC GTCGCCACCA GGCCCGCGCG GGTCACCTTC
ACCACAACCC CCTCCCGACC CGGCCGGGCA GCACGCACGC CCGGCCTGTC GCACGGGGAA
TCCCGACATC CCCGTCGCAC ATCACATCCG ATCCGGCGCG GTCCTCGCGT ACGCTCGGAT
CGCTGTGACC ATCACCGACC CCCACCCCAC CGCGCCCGCG CGGAGCATCC GGACATTTCA
CCCGCGACGC GGCCGGATGT CGCCGCGCCA GACCAGCGCG CTGCAACAGC TCTGGCCGCG
GTACGGCCTG ACCGTCCCGG AGATGCCCGG CACGCCCGTG AAGCCGGCTG TCCTGTTCCC
GCGCCGGGCG CCCCTGGTGT TGGAGATCGG TTCCGGGATG GGCGACGCCA CCGTGGCGAT
GGCCTCCGCC GATCCCGACC GAGACTATCT GGCGGTCGAG GTGCATACGC CGGGAATCGC
CAACCTCCTC GACCTGGTGG AACGGCAGTC CCTGAGCAAT GTCCGGATCG CCGAGGGCGA
CGCGTTGGAC CTGGTCAGCG CCCTGCCTAC GGGTTCACTC GATGCGGTAC ACATCTTCTT
TCCGGACCCG TGGCCAAAGG TCCGCCACCA CAAACGGCGC ATCATCCAGC CCGATCACGT
CGCCCTGCTG CGCTCGCGGT TGGCGACCGG TGGCACGCTG CACTGCGCGA CCGACTGGGC
CGAGTACGCC GAAGCGATGC GGCGGACCCT GGACGCCGAT CCGGGGCTGG TGAGCCCGCA
CGACGGGTTC GCGCCCCGCC CCGAGCACCG CCCGGTGACG AAGTTCGAGC GCCGCGCCCT
GACAGCGGGT CGACCGGTGG CCGACCTGAT CTACCACCGC CGCTGAGGCC CACCACGGGA
TGCGGTTCAA CCAGCACCGG GCAGACGCGG TTGACCGGCC CACCAGAGGC GAATGACCGG
CCCGATTGGC GCGCGGGAGG TGGGTCCAGG CACCATGGAC CCGCCATGAC ACTTACCGCC
GCGCTGCCGG CCAGCGCCGA CCCCGACACC CTGTACGACG CGTTCGCCGG TTGGGCGTCC
GAGCGCGGCC TCGATCTCTA TCCGCACCAG GAGGAGGCGG TCATCGAGAT CGTCTCCGGC
GCGAACGTGA TCATGAATAC GCCGACCGGG TCCGGCAAGA GCCTGGTCGC GATGGCGGCG
CACTTCGCCG CGCTCGCCGA TGACCGGACG ACCTTCTACA CAGCCCCGAT CAAGGCGCTG
GTGTCGGAGA AGTTCTTCGC GCTCTGCGAG GTGTTCGGGG CGGAGAACGT CGGGATGCTC
ACCGGCGATG CCAGCGTCAA CCCGGACGCG CCGGTCATCT GCTGTACGGC AGAGATCCTG
GCCAACCTCG CGCTGCGGGA GGGCACCCGC GCGGACGTCG GCCAAGTGAT CATGGACGAG
TTCCACTTCT ACAGCGAGCC GGACCGGGGC TGGGCGTGGC AGGTGCCGCT GATCGAGCTG
CCGCAGGCAC AGTTCATCCT GATGTCCGCC ACGCTCGGGG ACACCACCCG GTTCGTCGCC
GACCTGACCC GGCGCACCGG GCGCCCGACC GCCGTCGTCC AGACGGCCGA ACGACCGGTC
CCGCTGCTCT TCTCGTACGC GACGACGCCG ATGCACGAGA CCCTCGAGGA ACTGCTGGAG
ACCCGCGAAG CCCCGGTGTA CGTCGTACAC TTCACCCAGG CGGCGGCTTT GGAGCGGGCC
CAGGCCCTGA TGAGCGTCAA CGTCTGCACC CGGGCCGAGA AGGACACCAT CGCCACCGCG
ATCGGCAACT TCCGCTTCAC CTCCGGCTTC GGAAAGACCC TGTCCCGGCT GGTCCGGCAC
GGCATCGGCG TGCACCACGC CGGGATGCTG CCCAAGTACC GCCGCCTGGT GGAGACGCTG
GCCCAGGCCG GGCTCCTCAA GGTCATCTGC GGCACGGACA CCCTCGGTGT CGGCATCAAC
GTACCGATCC GCACCGTGCT CTTCACGGGG CTGTCAAAGT ACGACGGAAC CCGAACGCGA
CTCCTCAAGG CCCGCGAGTT CCACCAGATC GCCGGCCGCG CCGGACGGGC CGGCTTCGAC
ACCCTCGGCC GGGTCGTGGT GCAGGCCCCG GAGCACGTCA TCGAGAACGA GAAGGCCCTG
GCGAAGGCCG GCGACGACCC GAAGAAGCGC CGAAAGGTCG TCCGGAAGAA GCCGCCAGAG
GGGTCGATCG GCTGGGGCAA GCCCACCTTC GAACGCCTGG TCGAGGCCGA GCCGGAGCCC
CTGGCCTCCA GCTTCCAGGT CAGCCACTCC ATGCTGCTCA ACGTCATCGG CCGCCCCGGC
GACGCGTTCG CGGCGATGCG ACACCTGCTC ACCGACAACC ACGAGGACCG CGCCGCCCAG
CGCCGGCACA TCCGCCGCGC CATCGCCATC TACCGGGCGC TGCGCGCCGG TGGCGTCGTC
GAAGAACTAT CCGAGCCGGA CGAGTCCGGC CGACGGGCAC GACTCACCGT CGACCTCCAG
CTCGACTTCG CCCTCAACCA GCCGCTGTCG CCCCTCGCCC TTGCGGCAAT CGAGCTCCTC
GACCGCGAGT CCCCCGCCTA CGCCCTGGAT GTGCTCAGCG TGATCGAGTC GATCCTGGAC
GACCCGCGCC AGGTGCTGTC CGCGCAGCAG TTCAAGGCCC GCGGTGAGGC CGTCGCCGCG
ATGAAGGCGG AAGGCATCGA GTACGAAGCC CGCCTCGAAC TACTCGACGA GGTCACCTGG
CCCAAGCCCC TCGCCGAGCT GCTGGAGAGC GCGTACGAGA TGTACCGCCA GGGGCACCCC
TGGGTGGCCG ACCACCAGCT CTCCCCCAAG TCCGTCGTCC GGGACATGTA CGAACGGGCG
ATGACCTTCG CCGAGTACGT GCAGTTCTAC GGGTTGTCCC GGTCGGAGGG CCTCGTCCTG
CGGTACCTCG CCGACGCGTA CAAGACGCTC CGGCACACCG TCCCCGAGGA CGCTAAGACC
GAGGAGTTGG TCGACCTCAT CGAGTGGCTG GGCGAGCTGG TCCGCCAGGT CGACTCCAGC
CTCATCGACG AGTGGGAGCG GCTCCGTAAC CCCTCCGACG TCGACGAGGT CGCCGTCGCC
CTGGACGACC AGCCAACGGC GATCACCCGC AACACCCGGG CCTTCCGGGT GCTGGTGCGC
AACGCCCTGT TCCGTCGGGT GGAGCTGGCC GCCCTGCACC GCTGGAACGA GCTGGGCGAG
CTGGACGGCG CCGCCGGCTG GGACGCCGCC GCCTGGGAAG ATGCCCTGGA ACCGTACTTC
GAGGAGTACC CGGAGATCGG CATCGGGCCC AACGCCCGCG GACCCGCGCT GCTGCTGATC
GAGCAGGGCA GCGCGACCTG GACCGTACGC CAGATCCTGG ACGATCCCGA CGGTGACCAC
GACTGGGGAA TCAGCGCCGA GGTGGACCTC GCGGCCTCCG ACGAGGCGGG CGCGGCGGTC
ATCCGGATCA CCGAGGTCGG ACAGCTTGGC GCCTAG
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| Protein sequence | MAAGLGPSGC LRAATGRTAP SGVDAATGEV QADAGPATVG PADATWADAG PAVASAAPTA
SSGLTTATAT VATRPARVTF TTTPSRPGRA ARTPGLSHGE SRHPRRTSHP IRRGPRVRSD
RCDHHRPPPH RARAEHPDIS PATRPDVAAP DQRAATALAA VRPDRPGDAR HAREAGCPVP
APGAPGVGDR FRDGRRHRGD GLRRSRPRLS GGRGAYAGNR QPPRPGGTAV PEQCPDRRGR
RVGPGQRPAY GFTRCGTHLL SGPVAKGPPP QTAHHPARSR RPAALAVGDR WHAALRDRLG
RVRRSDAADP GRRSGAGEPA RRVRAPPRAP PGDEVRAPRP DSGSTGGRPD LPPPLRPTTG
CGSTSTGQTR LTGPPEANDR PDWRAGGGSR HHGPAMTLTA ALPASADPDT LYDAFAGWAS
ERGLDLYPHQ EEAVIEIVSG ANVIMNTPTG SGKSLVAMAA HFAALADDRT TFYTAPIKAL
VSEKFFALCE VFGAENVGML TGDASVNPDA PVICCTAEIL ANLALREGTR ADVGQVIMDE
FHFYSEPDRG WAWQVPLIEL PQAQFILMSA TLGDTTRFVA DLTRRTGRPT AVVQTAERPV
PLLFSYATTP MHETLEELLE TREAPVYVVH FTQAAALERA QALMSVNVCT RAEKDTIATA
IGNFRFTSGF GKTLSRLVRH GIGVHHAGML PKYRRLVETL AQAGLLKVIC GTDTLGVGIN
VPIRTVLFTG LSKYDGTRTR LLKAREFHQI AGRAGRAGFD TLGRVVVQAP EHVIENEKAL
AKAGDDPKKR RKVVRKKPPE GSIGWGKPTF ERLVEAEPEP LASSFQVSHS MLLNVIGRPG
DAFAAMRHLL TDNHEDRAAQ RRHIRRAIAI YRALRAGGVV EELSEPDESG RRARLTVDLQ
LDFALNQPLS PLALAAIELL DRESPAYALD VLSVIESILD DPRQVLSAQQ FKARGEAVAA
MKAEGIEYEA RLELLDEVTW PKPLAELLES AYEMYRQGHP WVADHQLSPK SVVRDMYERA
MTFAEYVQFY GLSRSEGLVL RYLADAYKTL RHTVPEDAKT EELVDLIEWL GELVRQVDSS
LIDEWERLRN PSDVDEVAVA LDDQPTAITR NTRAFRVLVR NALFRRVELA ALHRWNELGE
LDGAAGWDAA AWEDALEPYF EEYPEIGIGP NARGPALLLI EQGSATWTVR QILDDPDGDH
DWGISAEVDL AASDEAGAAV IRITEVGQLG A
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