Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1687 |
Symbol | |
ID | 5058146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1928460 |
End bp | 1929260 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640473959 |
Product | regulatory protein, TetR |
Protein accession | YP_001158529 |
Protein GI | 145594232 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTGGG GAACATCCAG CCCTTGGCGT TGCGCCGCAC GGGCGTCAGA CTCCGTGGCT GGCACGGAAG GTAGTCGAAA GCGCGTCGGG ACGCAACCGT ACCGTCGTTG CGGTACATTG TCGCACGTGA CGACCGAGAA GAGGCGTGCT CCGGCGGGTG CGGCGGTGCT GCGTGGTGAG ATCACCACGG CAATCCGCCG TGCCGTCCTG CAGGAACTGG CCGCGGTCGG GTATGGCCGT CTCTCTATTG AAGCGATCGC GCGGCGTGCT GGGGTCGGCA AGACCGCGAT CTACCGGCGG TGGAGCTCGA AGGTCGACCT CGTGCTCGAG GTGGTGGTGG CGGCGGTGGG GAAGCGGTTC CCCCTCCCGG ACACCGGTGG CCTTCGCGGT GACCTGGAGT TAGTGTTCTT GATCATGACT CGGGCGCTCG GGCATCCGCT GGCGGCCCAG ATCATCCCCG ACCTGCTCGC CGAGGCTGCC CGGAATGAGC AGATCGCGCA GACCCTGCAA CGGGTGCTGC GCGACAACCA GCGTGATATC GGCGGTCAGG TGGTTGGCCG GGCGGTTTCC CGGGGTGAGC TGCCACCCGA CATCGATCTC GATATCGCCG TCGACCTGAT CGTCGGCCCG CTGTACTGGC GGCTCGCGGT GTCTCGGACG CCGCTCGCCG TCGAAGAGCT GCCGGGTCTG GCCGCGGCTG TCGCCGCGGC CCTCGGGGTA GCATCCCAAC CGGCCGTTCC CAGTGAACTG GGCGTGCCGC TACCTGGCAC GGTAACCAGA ACCGATACCG GTCAGTCATG A
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Protein sequence | MAWGTSSPWR CAARASDSVA GTEGSRKRVG TQPYRRCGTL SHVTTEKRRA PAGAAVLRGE ITTAIRRAVL QELAAVGYGR LSIEAIARRA GVGKTAIYRR WSSKVDLVLE VVVAAVGKRF PLPDTGGLRG DLELVFLIMT RALGHPLAAQ IIPDLLAEAA RNEQIAQTLQ RVLRDNQRDI GGQVVGRAVS RGELPPDIDL DIAVDLIVGP LYWRLAVSRT PLAVEELPGL AAAVAAALGV ASQPAVPSEL GVPLPGTVTR TDTGQS
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