Gene Strop_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1628 
Symbol 
ID5058087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1851833 
End bp1852639 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID640473901 
ProductABC transporter related 
Protein accessionYP_001158471 
Protein GI145594174 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0337589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.368888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC CACCCGCTCT CGAGGCAGCC CGCCTGACGC TCGCGTACGA GTCACGTCAG 
GTCGCTCACG ATCTTGACGT CTCCATCCCG GACGGCGCGG TAACCGTGAT CCTCGGCCCG
AACGCGTGCG GCAAGTCGAC GCTGCTACGG GCGCTCGCGC GACTGCTCCG CCCCAGGACC
GGCCAGGTAC TGCTCCACGG CCAGGACGTA CAGCGGCTGG CCCCGAAGGA ACTGGCCCGC
CGACTCGGGC TGCTACCGCA GTCCTCCGTG GCGCCGGCCG GCATCACCGT CGCCGACCTC
GTCGGCCGTG GCCGCTTCCC GCACCAACGA ATGTTGCAGC AGTGGAGCCA CGAGGACGAA
GCGGCGGTGG CCCGGGCGCT CGCGGCGACC GGGGTGGCGG AGCTGGCGGA CCGGACCGTC
GAGGAGTTGT CCGGCGGCCA ACGACAGCGG GTGTGGATCG CACTGATCCT CGCCCAGGAG
ACGCCGGTGC TACTCCTGGA CGAACCCACC ACCTACCTCG ATATCTCACA CCAGCTCGAG
GTGCTCGAAC TGTGCCGACG GCTCAACCGC GACCAGGGGC GCACCGTGGT CCTGGTGCTG
CACGACCTCA ATCAGGCAGC ACGCTACGCC GACCATCTCG TGGTGCTGCA CGACGGCGCG
GTGGCGGCCA CCGGCGCCCC GCACACGGTG CTCACCGAGC AGTTGCTGCA CGACGTCTTC
CGGCTGAAGG CCCGCGTCGT CACCGACCCG GTGTTCGGCA CACCGCTGGT CATCCCGATC
GCCGCTCGGA ACACCGCCGC CGCGTGA
 
Protein sequence
MTSPPALEAA RLTLAYESRQ VAHDLDVSIP DGAVTVILGP NACGKSTLLR ALARLLRPRT 
GQVLLHGQDV QRLAPKELAR RLGLLPQSSV APAGITVADL VGRGRFPHQR MLQQWSHEDE
AAVARALAAT GVAELADRTV EELSGGQRQR VWIALILAQE TPVLLLDEPT TYLDISHQLE
VLELCRRLNR DQGRTVVLVL HDLNQAARYA DHLVVLHDGA VAATGAPHTV LTEQLLHDVF
RLKARVVTDP VFGTPLVIPI AARNTAAA