Gene Strop_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1610 
Symbol 
ID5058069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1830416 
End bp1831657 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content66% 
IMG OID640473883 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001158453 
Protein GI145594156 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGT TGCTTGTGCT GGGCGCTGGC ACGGCGGGCA CGATGGTGGT CAACAAGCTG 
CGGCACCGGC TGGCCCGCTC GGACTGGCAG ATCACCGTGG TGGAGCCCAA CGACACGCAC
TACTACCAGC CGGGCTACCT GTTCCTGCCA TTCGGCGTGT ACAGCCCGGA GCAGGTGCTC
AAGCCGACCG GGCCGCTGAT CTCCGACGGC GTGGAGCTGA TCTGCGGCGA GGTCGACCAG
GTGATGACGT CGGACAACCG GGTCCTGCTG TCCGACGGTC GGTCCCTGCC CTACGACTAT
CTGGTGATCG CCACCGGTGT CACACCGCGG CCAGACCAGA CCCCGGGCAT GCTCGACGGC
GGGCAGTGGC GTGAGCGGAT CTTCGACTTC TACACCTACG ACGGCGCGCT GGCCCTCGCG
AACGCCCTCG ACTCGTTCGA CGAGGGCCGG CTGGTCGTGC ACATCACCGA CATGCCGATC
AAATGCCCGG TCGCGCCACT GGAGTTCGCC TTCCTCGCCG ACGCGTACTT CCGGCAGCGT
GGCATGCGGG ACCGGGTCGA ACTGGTCTAC GCCACCCCGC TGCCCGGGGC ATTTACCAAA
CCGGTCGCGT CCGCCCGGCT CGGCTCGATG CTCGACGACC GGAAAATCAC CGTTGAGTCG
GACTTCCTGG TCGAACGCGT TGACGACACC ACCCTTGTCT CGTACGACGA GCGGGAAGTC
GGTTTCGACC TGTTGGTCAC TGTGCCCTTG AACATGGGCG CCGACTATGT TGCCCGCTCC
GGGTTGGGCA ACGAGCTGAA CCTGGTCCCG GTCGACCGGC ACACCATGCT CGCCAAGGGG
TACGACAACG TTTTCGCCCT CGGCGACGCC AGCGACATCC CGACCTCCAA GGCGGGGTCG
GTGGTGCACT TCTCCGTCGA GGTGTTCGTC GACAACTTCG TCGACCACGC CGCTGGCAGG
CCAATGACGG GCAGCTTCGA CGGGCACGCC AACTGCTTCG TTGAATCCGG CGACGGCAGG
GCGCTGCTCA TCGACTTCAA CTACGACACC GAGCCCCTGC CGGGCAGCTA CCCAGTGCCG
TTCGTCGGCC CGTTCCGCCT GCTCGACGAG GCCGCCGTTA ACCATTGGGG CAAGCTTGCG
TTCCGCTGGA TGTACTGGAA CGTGCTGTTG CCCGGGCGGC CAATTCCGTT GCCGGCGCAC
ATGTCGATGG CCGGCAAACA CGTCCCGAGA ACCGGAAAGT GA
 
Protein sequence
MRRLLVLGAG TAGTMVVNKL RHRLARSDWQ ITVVEPNDTH YYQPGYLFLP FGVYSPEQVL 
KPTGPLISDG VELICGEVDQ VMTSDNRVLL SDGRSLPYDY LVIATGVTPR PDQTPGMLDG
GQWRERIFDF YTYDGALALA NALDSFDEGR LVVHITDMPI KCPVAPLEFA FLADAYFRQR
GMRDRVELVY ATPLPGAFTK PVASARLGSM LDDRKITVES DFLVERVDDT TLVSYDEREV
GFDLLVTVPL NMGADYVARS GLGNELNLVP VDRHTMLAKG YDNVFALGDA SDIPTSKAGS
VVHFSVEVFV DNFVDHAAGR PMTGSFDGHA NCFVESGDGR ALLIDFNYDT EPLPGSYPVP
FVGPFRLLDE AAVNHWGKLA FRWMYWNVLL PGRPIPLPAH MSMAGKHVPR TGK