| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1560 |
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| Symbol | |
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| ID | 5058013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1772680 |
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| End bp | 1774116 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473828 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001158404 |
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| Protein GI | 145594107 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.677245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAATC CCGCGAGCCC ACCCGCCGTG GGCGTTCTCG CCGAACGCCC GCCACTGGCC
TTCCCGCCCG GCTTCCTCTG GGGCGCCGCC ACCGCGGCCT ACCAGATCGA GGGCGCGGCG
ACCGCCGGCG GTCGGACGCC GTCGATCTGG GACACCTTCA GCCACACCCC GGGCCGGGTG
GTGGCCGGGC ACACCGGTGA CGTGGCGTGC GACCACTACC ACCGCCTCGA CTCAGACGTC
GCCCTCATGG CCGAGTTGGG GCTGAGGTCG TACCGGTTCT CGGTCTCCTG GCCTCGGGTG
CAGCCCGGCG GAACCGGCCC GATCAACCAG GAGGGACTCG ACTTCTACCG GCGGCTGGTG
GACCAGCTGC TGGCGAACGG CATCGAGCCG TGGCTGACTC TCTACCACTG GGACCTGCCG
CAGCCGCTGG AGGACGCGGG CGGCTGGCCG GCCCGGGACA CCGCCGCCCG GTTCGCCGAC
TACGCCGCCC TGGTCGCCGG CGCGCTCGGC GACCGGGTGC GGTACTGGAC CACCCTCAAC
GAGCCGTGGT GCTCGGCGTT TCTCGGGTAC GGTTCCGGGG CGCACGCCCC GGGTCGGTCC
GACCCCGCCG CCGCGGTCCG GGCCGGTCAC CACCTGCTGC TCGGTCACGG GCTGGCCGTG
CCGGCGCTGC GGGCGGCCGC CCAGTCCGAG GTTGAGATCG GGGTGACCCT CAACCTGTAC
CCGGTGACCC CGGCCACCGA TTCGCCCGGC GACGCCGACG CGGCACGCCG AATCGACGGG
CTGGCGAACC GGTTCTTCCT CGACCCACTG CTGCGCGGGT CATACCCGGC GGATCTGATG
TCCGATCTCA GGCAGGTCAG CGACTTCGGG CACGTGCGTG CGGGGGACCT GGCCACCATC
GCCGCCCCGC TGGATCTGGT CGGGATCAAC TACTACAGCC GGCACGTGGT CGCCGCGCCG
ACGGCGGCGG CCCCGCCGGA GCCGTACTGG CGCACACCCT CGTGCTGGCC GGGTAGCGAA
GACGTTCGAT TTGTCGCCCG GGGCATGCCG GTCACCGACA TGGACTGGGA GATCGATCCT
TCCGGCCTGG TCGAGACGTT GCAGCGGGTG TACGAGGAGT ACACCGACCT GCCGCTCTAC
GTCACCGAGA ACGGTTCGGC CTTCGTAGAC GCGGTCGTTG ACGGGAAGGT GGACGACCCG
GACCGCGTCG CCTACTTCGA GGCGCACCTA CGCGCCGCAC ACCAGGCGAT CGCCGCGGGT
GTTCCGCTGC GCGGCTACTT CGCCTGGTCG TTGATGGATA ACTTCGAGTG GGCCTGGGGC
TACACGAAGC GGTTCGGCAT GATCCACGTC GACTACCGCA GTCAGGCCCG CACCCTGAAA
TCCAGCGGTC GGTGGTACGC CGAGACCATC CGACGTAACG GTCTGGCCGC ACAATAG
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| Protein sequence | MSNPASPPAV GVLAERPPLA FPPGFLWGAA TAAYQIEGAA TAGGRTPSIW DTFSHTPGRV
VAGHTGDVAC DHYHRLDSDV ALMAELGLRS YRFSVSWPRV QPGGTGPINQ EGLDFYRRLV
DQLLANGIEP WLTLYHWDLP QPLEDAGGWP ARDTAARFAD YAALVAGALG DRVRYWTTLN
EPWCSAFLGY GSGAHAPGRS DPAAAVRAGH HLLLGHGLAV PALRAAAQSE VEIGVTLNLY
PVTPATDSPG DADAARRIDG LANRFFLDPL LRGSYPADLM SDLRQVSDFG HVRAGDLATI
AAPLDLVGIN YYSRHVVAAP TAAAPPEPYW RTPSCWPGSE DVRFVARGMP VTDMDWEIDP
SGLVETLQRV YEEYTDLPLY VTENGSAFVD AVVDGKVDDP DRVAYFEAHL RAAHQAIAAG
VPLRGYFAWS LMDNFEWAWG YTKRFGMIHV DYRSQARTLK SSGRWYAETI RRNGLAAQ
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