Gene Strop_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1556 
Symbol 
ID5058009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1768451 
End bp1768996 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID640473824 
Productplasmid pRiA4b ORF-3 family protein 
Protein accessionYP_001158400 
Protein GI145594103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.568333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC AGATCTTCCA GCTGAGGATT TCCCTGGCCG GGGTCCGGCC GCTGGTCTGG 
CGCCGGGTGC TGGTCCCGGG TGGCTTCACC CTCGACCGGG TGCACCGGGT GGTGCAGCAC
GCGATGGGTT GGCGGGACTG CCACCTGCAC TCGTTCGAGA TCGACGGCGA GCAGTACGGG
GAACCCGACC CGGACGGCGA GCTGTCGCTC CGCGACGAGT TGGACGTGCG GCTGGACGCG
GTGGTCGGTA AGGGTAGTCG CTTCCACTAC ACCTACGACT TCGGCGACTG GTGGGAGCAT
GATCTGGTGG TGGAGGACGT CCTCCTCGCC GATCCGGAGG AGCGCTATCC CGCCTGTCCG
GGTGGGGATC GGGCGTGCCC GCCGGAGGAT GTCGGTGGCC CGGCTGGCTA CCAGGCGCTG
CTGGCTGCGT TGGCCGACCC GAGGCATCCG GAGCACCACA CGTTGCGTGA CTGGGCGGGT
GACCGCTTCG ATCCGGCGGC CTTCGAGGCG GGTCGGGTGG GCACGCTGCT TCGCCGATTC
TGCTGA
 
Protein sequence
MPRQIFQLRI SLAGVRPLVW RRVLVPGGFT LDRVHRVVQH AMGWRDCHLH SFEIDGEQYG 
EPDPDGELSL RDELDVRLDA VVGKGSRFHY TYDFGDWWEH DLVVEDVLLA DPEERYPACP
GGDRACPPED VGGPAGYQAL LAALADPRHP EHHTLRDWAG DRFDPAAFEA GRVGTLLRRF
C