Gene Strop_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1544 
Symbol 
ID5057997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1753282 
End bp1753773 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID640473812 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001158388 
Protein GI145594091 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.405729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCGG CGCCACACCC GCTGTGGCAT CCTCCCTGGA TGAGCGATGT GATCTTCCGG 
GAGGCGGTCC GGGCCGACCT GCCCACCGTG CTCGACCTGC TCGCCGACGA CCTGCTGGGC
CGGACACGTG ACGTCGGGCA GGTCGACGCC CGCTACGAGA AGGCGTTCGC GGACATCGCA
GCCGACCCGC GTAACCAGTT CGTCGTCGCC GAGTCCGATG GTGAGGTGCT GGGCTGCATG
CAGCTCACCT ACATTCCCGG GCTCAGCCGA CACGGCGCCG AGCGGCAGTT GATCGAGTCG
GTCCGGGTCC GCTCCGACCA GCGCGGACGA GGGCTGGGCC GGCAGATGAT GGTCTGGGCG
ATCGACCAGG CACGGGCGCG TGGATGTGCG CTGGTCCAGC TGACGACCGA CAAGTCCCGG
CACGCCGCGC ACCGCTTCTA TCTGGACCTC GGCTTCGTCG CCAGCCACGA GGGCATGAAA
CTGCCGCTGT GA
 
Protein sequence
MGAAPHPLWH PPWMSDVIFR EAVRADLPTV LDLLADDLLG RTRDVGQVDA RYEKAFADIA 
ADPRNQFVVA ESDGEVLGCM QLTYIPGLSR HGAERQLIES VRVRSDQRGR GLGRQMMVWA
IDQARARGCA LVQLTTDKSR HAAHRFYLDL GFVASHEGMK LPL