Gene Strop_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1542 
Symbol 
ID5057995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1751794 
End bp1752240 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID640473810 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_001158386 
Protein GI145594089 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.429453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.275961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATGGC TCCGACATCC GACGTACGGT TGGCGGGTGA GTCTCGACGA CAGTGAACTG 
CCCCGCACCG AGGACGAGTG GCGGGTTCGG CTGAGCCCCG ACGAGTTTCG GGTGCTGCGG
GAGCACGGCA CCGAGGCCCC GTGGAGCGGC GAGTACGTGG ACACCAAGAC CCCGGGGGTC
TACCACTGCC GCGCCTGCGG GCTGGAGCTG TTCGCCAGCG ATGCGAAGTT CGACTCGCAC
TGCGGCTGGC CGAGCTTCGA CGACGCCATT CCCGGGCGGG TCCGGGAGGT CGAGGATCGG
AGTATGGGCA TGGTGCGAAC GGAGATCCGC TGTGCCCGCT GCGACAGTCA CCTGGGGCAC
GTCTTCACCG GTGAGGGTTT CACCCCCAAG GACACCCGGC ACTGTGTGAA CTCGGTGTCT
CTCCGGCTGG AGCCACGCGA CACCTGA
 
Protein sequence
MRWLRHPTYG WRVSLDDSEL PRTEDEWRVR LSPDEFRVLR EHGTEAPWSG EYVDTKTPGV 
YHCRACGLEL FASDAKFDSH CGWPSFDDAI PGRVREVEDR SMGMVRTEIR CARCDSHLGH
VFTGEGFTPK DTRHCVNSVS LRLEPRDT