Gene Strop_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1510 
Symbol 
ID5057963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1721007 
End bp1723115 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content70% 
IMG OID640473778 
Producthypothetical protein 
Protein accessionYP_001158354 
Protein GI145594057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00655438 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTGACC GGCCAGGAAT GCTCGATTCG GTCAGGCTGG CGGCCAGGAA AGCGCCGATC 
TTTCAGCTCT ACCGACGCCG GGACCGCCTC CGCGCGACCC TGTGCAGGGT CAACGTGGCC
CTCGGCCAGG CGGATCCGCA AGACCCACTC ACCCGTCGCC GCGTTCGCGA GCTCGACACC
GCCGCGGTCC TGCTCGGCCA GGCCAGGTGG CACGCCGAAC GCGCTCGGGC GACCGGCGAC
ACCACCGCGC TGAAGCGCGC ACGGCAGGCG TTCACCGAGG GACAACGCCT CGCGGACCGC
ATCGAGGCAC TGGTCGCCGG TGGCAACGGT GCGTACGCGA CAGACCGCTT CCCCATCCTG
GAGCGGGCGG GCACCGAGAT CGATCACTGC CAGGGGGTTC CCCTGGTCCC CGCCATCACG
CCGGTGGTCG TCCTGCGGGG CAGCGACGAG GAGATGGGCG CGCAGTACGC CCGGCAGATC
GCGGCCATTT TCGGTCGCTG GATTCTCCGG TACGGCGTGC GCCGGCTCAC CGCCGACGAG
CGTGTTGAGG TCGGCCGGTG GGAGGCTGTC CACGGCGAAC ACCTGCCCTG GTTGGGCCGA
TTCGTCGACG GGTGGGTGGC CGGCGCGCGC GAGTCAGGAG TCAACCTGGA CCGAGCGTCG
ATCATGGATC TGTGGGTGGG GCACCGACCA CCGGCCACAA GCTGGCTCGA CGCCTCCTCC
GGGCTACCCG AACTACCCCC GATCGCCTGC ACGTCCCTCG CAGCCTGGGG GGAGTCCACG
CCGGACGGCG CCTTGGTCGC CGCCGCCACG GGCGATCACG AACTCTCGTA CCAGGTAACC
GTGGCAGCCT TCCCCGACGA CGGCCATCCA TTCGTGCACA CCATCTTCAG CGCGGCCGGC
ACACTACCGA CCGTCGGTCC CAACTGGTTC TTCGGCCACC CCGGCATGAG TCGATCCGGG
CTGGCCTACG TCCACCACGG CGGCGGGCCG AAGTTCCTCG AGCCGCGGCA CTCCTGGGGA
TACGGCCTGC GACGCACGCC ATCGGTCTGG CACCTCCTCC GCTACGCCAC GTCCGCCCAC
GACGCCCGCG AGATGGAACA GAGCTGGCCG ATCGGTGACG TCGGACGTGG TGACCAGGCG
ACAGTGGGCG GCTTCTACGC CGACGCCGAC TACGCGTACA TCATCGAAGG GCGCGACGAT
CCCGTCGCTG TCCGTGAAGC GGGCCTGCTC GGTGAACGCG ACTTCCTGTA TGCCAACAAC
AGTGCCATGC ACCCCGACGC GGTCCGCAGC GAATGGATGC GGCGGGCCCC CGACGGGAGC
TGGCTCTGGG ACCGGGAGGG CGGCTACCGG CCAGCCACAC CGCGTGGGAT GACCAAGTCA
CCCGGCATGC TGCTCAAATG GCTCAGTGGA CGCATGAGCA CCGACGAGCT CCTCGTCGCC
GGCATGCAGT TCGCCTACTG GAACAGCTAC CACCGCAACG TGTTCCTACG GCGGATGGCC
GACGCCCACC ACGGCCATCT CGACGTTGGG GCCCTGCGGG CCATATACCG AACCGTGGGT
ACCGCGCCGA CCGGATCCTG GGCGGCGGCC GTCCGCCGCT ACCGGCGTAC CGGCGAGTGG
AGTCGCATCT CCGCGGCGCA TGCGTCCAAC GCGTTTGTCG CCATCATGAA ACCGTCAACC
GGGTACTACT CGCTGTGTAC CGGACCCGCC CGCAGGGGTG CCGCGCCGAT GTCCCCCGAC
TCGGCGATGA TCGTTCGCGG AGAGACCAAC GCCTTCTGGG ACCTCGAACT CCCCGACACA
CCAACCGCCC TCGTCGAGCG CGCCGAAGCG CTGGCGGACC GACTACTTGG CCATGCACGC
GACACCGTGG CGGGAGCCAC GCACGCCGGA GAGACGGCGT CTGACGTTGC GGAATGGCTC
GCCGCCGCCC AGACGGACAC CTCATCGCCG CGGGACGCCG ACGGCATCGA GGCCCTGGGC
CGTCGGGTCC GCGCGGCGAC CAGAGCCCAG GTCCGGGCCC GGCAGATCCT GCACCTGGGT
GACCCGCCAC CCGAGTTCAC ACTTCCCGAG AGACGGAAGC CGCCCCGGCC GTCGGTTGGC
ACTCCATAG
 
Protein sequence
MADRPGMLDS VRLAARKAPI FQLYRRRDRL RATLCRVNVA LGQADPQDPL TRRRVRELDT 
AAVLLGQARW HAERARATGD TTALKRARQA FTEGQRLADR IEALVAGGNG AYATDRFPIL
ERAGTEIDHC QGVPLVPAIT PVVVLRGSDE EMGAQYARQI AAIFGRWILR YGVRRLTADE
RVEVGRWEAV HGEHLPWLGR FVDGWVAGAR ESGVNLDRAS IMDLWVGHRP PATSWLDASS
GLPELPPIAC TSLAAWGEST PDGALVAAAT GDHELSYQVT VAAFPDDGHP FVHTIFSAAG
TLPTVGPNWF FGHPGMSRSG LAYVHHGGGP KFLEPRHSWG YGLRRTPSVW HLLRYATSAH
DAREMEQSWP IGDVGRGDQA TVGGFYADAD YAYIIEGRDD PVAVREAGLL GERDFLYANN
SAMHPDAVRS EWMRRAPDGS WLWDREGGYR PATPRGMTKS PGMLLKWLSG RMSTDELLVA
GMQFAYWNSY HRNVFLRRMA DAHHGHLDVG ALRAIYRTVG TAPTGSWAAA VRRYRRTGEW
SRISAAHASN AFVAIMKPST GYYSLCTGPA RRGAAPMSPD SAMIVRGETN AFWDLELPDT
PTALVERAEA LADRLLGHAR DTVAGATHAG ETASDVAEWL AAAQTDTSSP RDADGIEALG
RRVRAATRAQ VRARQILHLG DPPPEFTLPE RRKPPRPSVG TP