| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1497 |
|---|
| Symbol | |
|---|
| ID | 5057950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1708990 |
|---|
| End bp | 1710159 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640473765 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_001158341 |
|---|
| Protein GI | 145594044 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.360168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.463121 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCG GCCGGGGCAT GCGGCCTACC CTGCGCCTGC GGCTGACCCT GCTCAACGGG
TTACTGCTGG TGGGCGCCGG GGTGATCCTG GTGCTGCTGG CCTGGCTGCT GGTGCGCGAC
GCGCTGCGCC CCACCGACGA GCTGCTCGCC GGGACGACGG TGGTGCTGGC CGACGGCCGT
TCCCTGGACG CCGCCGAGTG GCAGCGGCAG CTGGGCGAGA CGGCGAGCCA GGAGCTGCTG
GCCAAGGGGC TGGCGGCGTT GCTGGCGATC AGCGTGGTCG GGGTGGCCGG CGGCTATCTG
GTCGCCGGTC GGGCACTGCG CCCGCTCTAC CAGGTCACCG CCACCGCCCG ACGGCTCGGC
GAGACCACCC TCGATCAGCG CATCGGCTAC TCGGGGGCGG ACGACGAGGT GGCCGAGCTG
GCGCAGACCT TCGACGCGAT GCTGGACCGC ATCGCGGTCG CGTTCGACGC GCAGAAGCGC
TTCGTCGCCA ACGCCTCACA CGAGCTGCGG ACCCCGCTCG CCGTGATGCG CACTGAGATC
GACGTGACGC TCAGCGACGA CGAGGCGGAT ACCGCCGAGT ACCGCCGGAT GTCGACTGTT
GTCCGGGATG CCTCGGAGCG GGCCAACGGC CTGGTGGACG CGCTTTTGGT GTTGGCCCGT
AGTGAGGCGC AGGCCGGCCA CCGCCTCGCC CGGCGGACGG AGTGTGATCT GGCTGCCGGC
ACCGCCAACG CGCTGACGGC GGTACGCCGG GAGGTGGAGC GGATCGGTCT GCGGGTGCAG
ACCTCACTCG AGTCGGCACC GGTGGTCGGC GACCCCGGGC TGCTCGACCG GCTCGCCGGG
AACCTCGTCG AGAACGCGGT GCGCTACAAC CATCTGCACG GCCGGCTCTG GGTGCGGACC
GGCTCGGACG GCCGGCGGTC CTGGCTGGTG GTGGGCAACA CCGGCTTCGA GGTGGACCAA
GCCGATGTGC CGGGGCTGTT CGAGCCGTTC CGGCGGGGTG GCCGGGAACG GACCGGCGCC
CGGGGCTCCG GTCTCGGGCT CTCCATCGTC CGGGCCGTCT GCGACGCGCA CGGCGGCACG
GTGAAGGTGA TCGCGCAGCC GGGCGGTGGC CTGGAGGTGA CGGTGACGCT GCCGGCAGCA
GATGGGCTGG GCCCTGCCGT GACGCGGTGA
|
|---|
| Protein sequence | MTAGRGMRPT LRLRLTLLNG LLLVGAGVIL VLLAWLLVRD ALRPTDELLA GTTVVLADGR
SLDAAEWQRQ LGETASQELL AKGLAALLAI SVVGVAGGYL VAGRALRPLY QVTATARRLG
ETTLDQRIGY SGADDEVAEL AQTFDAMLDR IAVAFDAQKR FVANASHELR TPLAVMRTEI
DVTLSDDEAD TAEYRRMSTV VRDASERANG LVDALLVLAR SEAQAGHRLA RRTECDLAAG
TANALTAVRR EVERIGLRVQ TSLESAPVVG DPGLLDRLAG NLVENAVRYN HLHGRLWVRT
GSDGRRSWLV VGNTGFEVDQ ADVPGLFEPF RRGGRERTGA RGSGLGLSIV RAVCDAHGGT
VKVIAQPGGG LEVTVTLPAA DGLGPAVTR
|
|---|
| |